Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_1473
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Entry
PSTAB_1473 CDS
T01571
Symbol
ygbO
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psz03016
]
PSTAB_1473 (ygbO)
Enzymes [BR:
psz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PSTAB_1473 (ygbO)
Transfer RNA biogenesis [BR:
psz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSTAB_1473 (ygbO)
Prokaryotic type
PSTAB_1473 (ygbO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEJ04754
UniProt:
F8H5C1
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All DBs
Position
1535044..1536084
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AA seq
346 aa
AA seq
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MTEDQLLGPRAHGEPCGSAVLKAVAEDFQVDEVLDIPLSGEGEHLWLWVEKRNLNTEEAA
KRIARAAGVPLKLISYAGLKDRQALTRQWFSLHLPGKADPDLSAAEDDSLRLLQRVRHQR
KLQRGAHSANGFRLRLTDLHADHAQLDARLERIRAQGVPNYFGLQRFGYEGGNLLGARDF
AAKAELPVQRNLRSRLLSAGRSYLFNRVLAQRVADGSWAEARVGDLLAFTDSRSFFPAAE
AECSDPRLAILDLHPTGPLWGEGGSPAGAEIQALEDAVAASEEPIANWLAQAGMKHERRI
LRLPIGGLSWHYPGPDILQLEFVLPTGCFATAMVRELVSLAGQTDI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggatcagctgctcggcccgcgtgcccacggcgagccttgtggcagcgctgtg
ctcaaggcggtcgccgaggacttccaggtcgacgaggtgctggacatccccctgtcgggg
gagggtgagcacctctggctctgggtggaaaagcgcaacctcaacaccgaggaggccgcc
aagcgcatcgcccgtgctgccggcgtcccactgaagctgatcagctatgcgggcctgaag
gatcgtcaggcgctgacccggcagtggttcagcctgcatttgccgggcaaggccgacccc
gatctgtctgccgccgaagatgacagcctgcggctgctccagcgcgttcgccatcagcgc
aagctgcagcgcggcgcacattcggccaatggctttcgcctgcgcctgaccgatctgcat
gccgatcacgcgcagctcgatgcgcggctggagcggatcagggcgcagggcgtgccgaac
tacttcggtctgcaacgtttcggctatgaaggtggcaacctccttggcgcccgtgatttc
gccgccaaggccgagctgccggttcagcgtaacctgcgttcgcgtctgctttcggcgggg
cgcagctacctgttcaatcgcgtgctggcccagcgtgtcgccgatggcagctgggccgag
gcgcgggtaggggacctgctggcgttcaccgacagccgcagtttctttcccgccgcagag
gcggagtgcagcgatccgcgcctggcgatcctcgacctgcatcccactggcccgctttgg
ggtgaagggggctcgccggcgggcgccgagatccaggcgctcgaagatgcagtggctgca
agtgaagaaccgatcgccaattggttggcgcaggcggggatgaagcacgaacggcgcatt
cttcgcctccccattggcggtttgtcgtggcattatcccgggcctgacattctgcaactg
gaattcgtcctgccgaccggatgcttcgccaccgccatggtgcgtgagctggtcagcctg
gcagggcagacggacatctga
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