Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_1860
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Entry
PSTAB_1860 CDS
T01571
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_1860 (phrB)
Enzymes [BR:
psz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSTAB_1860 (phrB)
DNA repair and recombination proteins [BR:
psz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSTAB_1860 (phrB)
Prokaryotic type
PSTAB_1860 (phrB)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEJ05141
UniProt:
F8H9B9
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All DBs
Position
complement(1968587..1970017)
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AA seq
476 aa
AA seq
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MTQLIWLRSDLRTSDNTALASAMAAGPTVAVYLITPGQWLAHDDAVCKVDFWLRNLVELA
GRLQALNVPLLIRDVEDWQAAPDALLKLCQELAVQRLHYNDEYGVNEQRRDQAVVARLRA
AGIDVRGYLDQLLFAPGSVLTQSGGYFKVFGQFRRACLARLAMSLPACVAPPAPQQAMTV
TSDVPPDEVRGFDRPSDYLRTLWPAGETFAQHRLAAFIEDDLHQYHQRRDLPAEPGTSQL
SAYLAAGVISIRQCLHAAVASNRGELDSGSAGATTWINELLWREFYKHILVGYPRVSMHR
AFRAETEALPWRRATDELQAWQEGRTGFPIIDAAMRQLRETGWMHNRLRMVTAMFLSKNL
LIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDSVPYFRLFNPISQSQRFDPDGQFL
RRWLPELQGLGKREIHNPSAQRSLFGKADYPAPIIDLGESRARALDAFRNLPDVRP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctgatctggctgcgcagcgatctgcgcacgagcgacaacaccgccctggcg
tctgccatggccgccggccctaccgtcgcggtctacctgatcacgcccggccagtggctc
gcccatgacgatgccgtctgcaaggtggacttctggctgcgcaacctcgtcgagctggcg
ggccggctgcaggcgctcaatgtgccgctgctgattcgcgacgtagaggattggcaggcc
gcgcccgacgcgttgctcaagctctgccaggagctggccgtgcagcgcctgcactacaac
gacgaatacggcgtcaacgagcaacgccgtgaccaggccgttgtcgcccggctgcgggcc
gccggcatcgacgtgcgcggctatctcgaccagctgctgttcgcgccgggtagcgtgctc
acccagtcgggtggctacttcaaggtgttcggccagttccgccgcgcctgccttgcacgc
ctggcgatgtcgctgccggcatgcgtcgcgccaccggccccgcagcaagccatgaccgtc
accagcgacgtgccaccggacgaggtgcgcggcttcgatcggccgagcgactacctgcgc
acgctgtggcccgccggcgaaaccttcgcccagcaccgcctggcggcgttcatcgaagac
gatctgcaccagtaccaccaacgccgcgacctgccggccgaacccggcaccagccagctg
tcggcttatctcgcggctggtgtcatctccatccgccagtgtctgcacgcggccgtggca
agcaaccgcggcgagctggacagcgggagcgccggcgccaccacctggatcaacgagctg
ctctggcgtgagttctacaagcacatcctggtcggctacccacgggtctcgatgcaccgc
gccttccgcgccgagaccgaagcgctgccgtggcgccgcgcgaccgacgagctgcaggcc
tggcaagagggccgcaccggttttccgatcatcgatgcggcgatgcggcagctgcgggaa
accggctggatgcacaaccgcctgcgcatggtcacggccatgttcctcagcaagaacctg
ctgatcgactggcgcgagggcgagcgctggttcatgcgccacctgatcgacggcgatctg
gccgccaacaacggcggctggcagtggagcgcgtccaccggaaccgactcggtgccctac
ttccgcctgttcaaccccatcagccagtcacagcgcttcgacccggacggccagttcctg
cgccgctggctgccggaactgcagggactgggcaagcgcgagatacacaacccatccgcg
cagcgcagcctgttcggcaaggccgattacccggcaccgatcatcgacctcggggaaagc
cgcgcgcgagccctggacgccttccgcaacctgccggacgtccggccatga
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