Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_2101
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Entry
PSTAB_2101 CDS
T01571
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psz03032
]
PSTAB_2101
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_2101
Enzymes [BR:
psz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSTAB_2101
DNA replication proteins [BR:
psz03032
]
Prokaryotic type
DNA Topoisomerases
PSTAB_2101
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSTAB_2101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AEJ05382
UniProt:
F8GZC1
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All DBs
Position
2249926..2250930
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AA seq
334 aa
AA seq
DB search
MPYPATRPALCGRCAARHPPPTARGKFAYFAPSGERIRDEEEIRRINKLAIPPAYRDVWI
CPDPQGHLQATGRDARGRKQYRYHPRWREIRDSDKYERMLEFGEALPKLRRDLEKHLALP
GMPRDKVMALVVTLLESTLIRIGNSRYARDNRSYGLTTLRTRHVNVSSTAVRFHFRGKSG
VEHEVTLRDRRLARLMRRCMELPGQQLFQYLDEDGQRRAVSSNDVNLYLREMTGRDFTAK
DYRTWAGSALALERLRKLDASSASVARQNLVETVKQVASQLGNTPAVCRQCYIHPAILQA
FSDGELVKLRVARKRKWLSAEEVALLAFLRKAAD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgccctaccctgccacccgacctgcattatgtggacgatgcgcagccaggcatccgccg
ccgacagcgcgtggaaagttcgcctatttcgctccgagcggcgagcgcatccgtgatgaa
gaagagattcgccggatcaacaaactggcgatccccccggcctatcgggacgtctggatc
tgccccgacccgcaagggcatctccaggccacgggacgcgatgcccgcggacgcaagcag
tatcgttaccatccgcgctggcgggaaatccgcgacagcgacaagtacgagcgcatgctg
gagttcggcgaagccctgcccaagctgcgccgcgatctggaaaagcacctggccctgccc
ggcatgccacgcgacaaggtcatggcgctggtggtcacgttgctcgaatcgaccctgatt
cgcatcggcaattcccgctacgccagggacaaccggtcctacggcctgaccacactgcgc
acgcgccacgtgaacgttagcagcaccgcggtccgcttccatttccgcggcaagagtggc
gtggagcacgaggtgacgctgcgcgaccggcgcctggccaggctcatgcgccgctgcatg
gagctaccgggccagcagttgttccagtatctggatgaggatggccaacgccgtgcagtc
agctccaacgacgtgaatctctatttacgggaaatgaccggccgcgatttcaccgccaag
gactatcggacctgggccggcagcgcgttggcgctggaacggttgcgcaagctcgacgca
tcctcggcaagtgtcgcgcgacagaacctggtggaaaccgtcaagcaggtcgcgagccag
ctgggcaataccccggcggtctgtcgccagtgctatatccatccggcgattctgcaagcc
ttcagcgatggggagctggtcaagctacgggtagcgcgcaagcgcaaatggctgagcgcc
gaggaagtcgccctgcttgcgtttctgcgcaaagcggccgattga
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