Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_2367
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Entry
PSTAB_2367 CDS
T01571
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSTAB_2367 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psz03019
]
PSTAB_2367 (recQ)
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_2367 (recQ)
Enzymes [BR:
psz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSTAB_2367 (recQ)
Messenger RNA biogenesis [BR:
psz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSTAB_2367 (recQ)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSTAB_2367 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
HTH_23
ResIII
HTH_31
HTH_7
HTH_20
GerE
HTH_29
PAX
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
AEJ05648
UniProt:
F8H1H0
LinkDB
All DBs
Position
complement(2549730..2551853)
Genome browser
AA seq
707 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLREGLA
VVVSPLIALMDDQVATLDELGVSAVALNSTLSTDEQRDIAERIRRGEIKMLYLAPERLVQ
PRMLAFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLAELFPNVPRIALTATADKRT
REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK
VDDLAAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEELPRPCGHCDNCVDGVQTWDATEPARQALSAIYRSG
QRYGVGHLVDVLLGRDNDKVRGLGHQHLSVFGVGKALSEGEWRSLFRQLVARGLADVDLE
GFGGLRLSDSCRPLLRGEVNLELRRDLSSKAPKPASSAASQLVRSEERETWEALRTLRRK
LAEEHSVPPYVIFPDATLLEMLRSQPASLADMARISGVGARKLERYGQAFLEVLQGTVEV
VRSPADLRHELVTLARAGMTPAQIARQLDCSEKNVYTLLAEAIGKQQLSLEQALDLPEDL
LGEIQEAFLDGEGELPPVGDVAPLFAGRVPEQVLYCVRAALQAEFEL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacagcgcatcctcaaagacgtattcggttacgacgcctttcgcggc
aaccagggcgcgatcatcgagcgtgtgggcagtggcggcgatgcgctggtattgatgccg
accggcggcggcaagtcgctctgctatcaggttccggcgctcttgcgcgaggggctggcg
gtggtggtttcgccgctcatcgcgctgatggacgaccaggtcgccacgctcgatgagcta
ggcgtctcggccgtcgccctcaactcgacgttgagcacggacgagcagcgcgacatcgcc
gagcgtatccgtcgcggcgagatcaagatgctctacctggcgcccgaacgcctggtccag
ccacgcatgctggccttcctgcagcggctcgagatcgccctgttcgccatcgacgaagcg
cattgcgtgtcccagtggggccatgatttccgtcctgagtacatgcagctgggccagctc
gccgagctgtttcccaacgttccgcggatcgccctgaccgccacggcggacaagcgcacc
cgcgaggaaatcgttcagcgcctgcatctggaaaatgccgagcggtttctctccagcttc
gaccggccgaacatcttctatcgcatcgtgcccaaggaacagccacgcaagcagctgctg
ggctttctcgccgagcgccgcggcgacgccggcatcgtctactgcatgtcgcgcaaaaag
gtcgatgatctggccgccttcctcaccgaacagggctttccggcgctgccttatcacgcg
ggcttgcccaatgagctgcgcgcctatcaccagaagcgctttctcaacgaggaagggctg
atcatggtggcgaccattgccttcggcatgggcatcgacaagcccaacgtgcgtttcgtc
gcccacctcgacctgcccaagtcgctggaggcctactatcaggaaaccggtcgggcaggg
cgtgacgggctaccggccgacgcctggatggcctatggcctgcaagatgtaatcttcctc
aagcagatgctcaacaattccgagggtgatgagcggcacaagcgggtcgagcagcacaag
ctcgatgcaatgctggcgctctgcgaggaaacccgttgccgacgccaggcgttgctggcg
tacttcgacgaagagctgcccaggccttgcggccattgcgacaactgcgtcgacggggtg
cagacctgggacgccaccgagcccgctcgccaagcgctttcagccatctatcgcagtggt
cagcgctatggcgtcgggcatctggtggatgtcttgctgggacgcgacaacgacaaggta
cgcggcctcggccatcagcatctgtcagtgttcggcgtcggcaaggcgttgtccgagggt
gaatggcgctcgctgttccgccagctggtcgcccgcggtttggccgatgtcgatctcgaa
ggctttggcggcttgcggttgagcgatagctgccgcccgctgctgcgtggtgaagtcaac
ctcgagctgcgccgggatctatccagcaaagcgccgaaaccggcatccagtgccgccagc
caattggtgcgcagcgaggagcgcgagacctgggaggcgttgcgtacgctgcggcgcaag
ctggccgaagagcacagcgtgccgccctatgtgatctttccggacgccaccctgcttgaa
atgctgcgcagccagccggcgtcgctcgcggacatggcgcgcatcagcggcgtcggcgcg
cgcaagctggagcgctacggccaggcctttctcgaggtcttgcagggtacagtcgaggtg
gtcaggtcgccggctgacctgcgtcatgaactcgtgaccctggcccgcgccggcatgacg
ccggcgcagattgcgcgccagctcgattgcagcgagaagaacgtctacacgctgctcgcc
gaggccatcggcaagcagcagctgagcctggagcaggcgctcgacctgccggaagacctg
cttggcgagattcaggaagcctttctcgacggcgagggcgagctgcctccggtgggggat
gtggcaccgctgttcgccggacgggtcccggagcaggtgctctattgcgtgcgcgctgcg
ctgcaggccgagttcgaattgtaa
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integrated database retrieval system
