Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_2407
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Entry
PSTAB_2407 CDS
T01571
Symbol
capD
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz00541
Biosynthesis of various nucleotide sugars
psz00552
Teichoic acid biosynthesis
psz01100
Metabolic pathways
psz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSTAB_2407 (capD)
00552 Teichoic acid biosynthesis
PSTAB_2407 (capD)
Enzymes [BR:
psz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
PSTAB_2407 (capD)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
NAD_binding_4
CoA_binding
ApbA
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
AEJ05688
UniProt:
F8H216
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Position
complement(2593208..2595220)
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AA seq
670 aa
AA seq
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MLRFAEKLRARLVRLPRRQKRLIQVATDVVLVWSALWLAFFVRVGEAGFVEPLSGHAWIF
GIAPLLSIPFFVRFGMYRAVMRYFGSDALMAIVKAVTLSALTLSLAIYWRSDVPKVIPRS
MVFNYWWLSLVLIGGLRLVMRQYFMGDWFSPDSTIKFKFKGKDAGLPKVAVYGAGAAGNQ
LVAALRMGRAMRPVAFIDDDPNLQNRSIAGLRVYSAKHITQMVEETGAAEILLAIPSASR
GRRREILEMLERFPLHVRSVPGFMDLASGKVQVEDIQEVDIADLLGRDAVPPQQALFEKC
IRGKVVMVTGAGGSIGSELCRQILSSKPKALLLFEHCEFNLYSIHLELERLIERSSLATR
LVPILGSIRNPERLLDVMRTWEVETIYHAAAYKHVPMVEHNVAEGVLNNVIGTLNTAQAA
VQAGVSNFVLISTDKAVRPTNVMGSTKRVAELILQALSREPAPCLFGASGVHHVNKTRFT
MVRFGNVLGSSGSVIPRFYAQIRAGGPVTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGD
VFVLDMGQPVKIAELAEKLIHLSGLSVRSEKCPHGDIAIEYTGLRPGEKLYEELLIGDNV
SATEHPMIMRANEEHLDWDVLKDRLAKLLKAVESDDYPQVRQLLREVVSGYVPEGEIVDW
IYQQRRVELE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaggtttgctgagaaacttcgtgcccgtctggtgcggctgccgaggcggcagaag
cggctgattcaggtggcgaccgatgtggtgctggtctggtcggctctttggctggcgttt
ttcgtgcgggttggcgaggccgggtttgtcgagccattgagtggtcacgcttggatattc
ggtatagcgccgcttctctccatccctttctttgtgcgctttggcatgtaccgtgcggtg
atgcgctatttcggcagcgatgcgctgatggccatcgtcaaggccgtcacgctgtcggcg
ctgacgctgtcgctggcgatctactggcggagcgacgtgcccaaggtcatcccgcgttcg
atggtgttcaactactggtggctcagcctggtactgattggtggcctgcgcctggtgatg
cgccagtacttcatgggtgactggttttcccccgactcgaccatcaagttcaagttcaag
ggcaaggatgccgggttgccgaaggtggcagtttacggtgccggcgcggcgggtaatcag
ctggtggcggccttgcgcatgggccgggcgatgcgaccggtggccttcatcgacgacgat
ccgaacctgcagaaccgttccattgccgggctgcgcgtctattcggccaagcacatcact
cagatggtggaggagaccggcgcggccgaaatcctgctggccattccttctgcctcgcgg
ggccgtcggcgcgagattctggaaatgctcgagcgttttccactgcatgtgcgcagtgtg
cctggctttatggatttagcgagcggcaaggtgcaggtcgaagatatccaggaagtggat
atcgccgacctgttagggcgcgatgctgtgccgccgcagcaggcactgttcgagaaatgc
atccgcggcaaggtggtgatggtgaccggtgcgggtggctccatcggttcggagttgtgc
cggcagatcctgtcgagcaagcccaaggcgctcctgctgttcgagcactgcgaattcaat
ctgtacagcatccaccttgaactggagaggttgatcgaacggtcgtcgctggcaacccgg
ctggtgcccatcctggggtcgattcgcaacccggagcgtttgttggacgtgatgcgcacc
tgggaggtggagacgatctaccacgccgcggcttacaagcatgtgccgatggtcgaacac
aatgtggcggagggcgtactgaacaacgtgatcggcaccttgaacacggcacaggcagcg
gtgcaggctggtgtcagcaacttcgttctaatttctaccgacaaggctgttcgcccgacc
aatgtgatgggcagcaccaagcgtgtggctgagctgattctgcaggcgttgagccgtgag
ccggcaccgtgtctgttcggcgcctccggggtccatcacgtcaacaagacgcgcttcacc
atggtgcgattcggtaatgtgctcggctcgtcaggctcggtgataccgcgcttctatgcg
cagattcgtgcgggcgggccggtgacggtgacgcatccgaagatcacccgttatttcatg
accattcccgaagcggctcagctggtgattcaggcgggctcgatggggcagggcggtgac
gtgttcgtgctggatatgggccagccggtgaagatcgctgagttggccgagaagttgatt
catctatccggtctcagcgtgcgttccgagaagtgtccgcacggggacattgccatcgag
tacaccggcctgcgacccggtgaaaagctttacgaggagctgctgattggtgacaacgtc
agtgccaccgagcacccgatgatcatgcgcgccaatgaggagcatctcgattgggatgta
ctcaaggaccggctggcgaagctgctcaaggcggtggaaagcgatgattacccgcaggtg
cggcagctgcttcgcgaagtagtgagtggttatgtgccggagggggagatcgtcgactgg
atctatcagcagcggcgagtggagctggaataa
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