Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_2597
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Entry
PSTAB_2597 CDS
T01571
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03030
DNA replication
psz03430
Mismatch repair
psz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSTAB_2597 (holB)
03430 Mismatch repair
PSTAB_2597 (holB)
03440 Homologous recombination
PSTAB_2597 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psz03032
]
PSTAB_2597 (holB)
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_2597 (holB)
Enzymes [BR:
psz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSTAB_2597 (holB)
DNA replication proteins [BR:
psz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSTAB_2597 (holB)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSTAB_2597 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
Mg_chelatase
AAA_16
nSTAND3
AAA_22
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEJ05878
UniProt:
A0A427GDY4
F8H3S9
LinkDB
All DBs
Position
complement(2790848..2791834)
Genome browser
AA seq
328 aa
AA seq
DB search
MTDVLPWQVDLWRQLAGRAQHAHAYLLHGPAGIGKRLLAEQLMALLLCQRPVEARACGEC
KACQLLAAQTHPDHYVLEPEEVDKAIRVDQVRDLVGFVTQTAQLGGRKVILLEPAEAMNL
NAANALLKSLEEPSGDTVLLLISHQPSRLLPTIKSRCVQQACPLPGRQQSLDWLAARLPE
LGPELREQLLTLAAGSPLAALKLHEQKVLELRAQVVDGVKKLLKQQQSASQLAEGWNALP
LILLFDWFCEWAHLILRYQMAGDEAELGAADMQKVLQYLAQKSSQQKVIALQDWLLEHRQ
KVLGKANLNRVLLLEALLVQWATLPGAG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgtgcttccctggcaggtcgatctctggcggcagctggcggggcgcgcccag
catgcgcatgcgtacctgctacatggtcccgccggcatcggcaaacggctgctggccgag
cagctgatggcgctgctgctctgccagcggccggtcgaggcccgcgcctgcggcgaatgc
aaggcctgccagctgcttgccgcacagacccatccggatcactacgtcctcgagcccgag
gaagtcgacaaggccatccgggtcgatcaggtccgcgatctggtcggtttcgttacccag
acggcgcagctgggtgggcgcaaggtgatcctcctggagcccgccgaggcaatgaacctg
aatgcggccaatgccttgctgaaaagcctggaggaaccgtccggtgacacggtgcttctg
ttgatcagtcatcagcccagccgtctgctgccgacgatcaagagccgctgcgtccagcag
gcctgcccgttgccaggtcgccagcaaagcctcgactggctcgccgcgcgcctacccgag
cttggcccggagcttcgcgaacagttgctgacgctcgccgccgggtcgccgctggcggcg
ctgaagttgcacgagcagaaggtgctggagttgcgcgcccaggtggtcgacggggtgaag
aaactgctcaagcaacagcaatcggccagtcagctcgccgagggctggaacgcgttacca
ctgatcctgctcttcgactggttctgcgaatgggcgcatctgatcctgcgttaccagatg
gccggcgatgaagccgagctgggcgctgccgatatgcagaaggtgctgcagtatctcgcg
cagaaatcctcgcagcaaaaagtgatcgccctgcaggactggttgctcgagcatcggcag
aaagtgctgggcaaagccaacctcaaccgtgtgttgcttctcgaagcgctgctggtgcag
tgggcaacgctgcccggcgcgggctag
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