Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_2664
Help
Entry
PSTAB_2664 CDS
T01571
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psz03009
]
PSTAB_2664 (srmB)
Enzymes [BR:
psz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSTAB_2664 (srmB)
Ribosome biogenesis [BR:
psz03009
]
Prokaryotic type
rRNA helicases
PSTAB_2664 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AEJ05945
UniProt:
F8H4N6
LinkDB
All DBs
Position
complement(2862351..2863682)
Genome browser
AA seq
443 aa
AA seq
DB search
MFDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLN
RLIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDVLIGTPGRLIEHLNAGSLILKDVEILVIDEADRMLDMGFAEDMQRLVGECEKRQQTL
LFSATSGGAGLREMVAKVLRDPLHLQLNRVSELNEATRQQVITADDVAHKERLVHWLLAN
ESYQKAVIFTNTRAQADRLYGHLVASDIKVFVLHGEKDQKERKLAIERLKQGGVKVLVAT
DVAARGLDIEGMDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHNDWNLMSSIER
YLKQRFEKRVIKGLKGTYQGPKNLKASGKAAGSKKKKVDKKKGVEKKSKPAGKRPNGAKR
EAPSPVVSQDGMAPLKRKKPAAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaccaattcgccctgcacgaacgcctgctcaaggccgtcgccgaactcaaattc
gtcgagccgaccccggtgcaggtggcggcgattccgccggcgctggaagggcgcgatctg
cgtgtgacggcccagaccggcagtggcaagacggctgcgttcgtgctgccaatgctcaac
cggctgatcggcgatgcccagccgcgggtcgatgtacgcgcgctgatcctgttgccgacc
cgcgaactggcccagcagaccctcaaggaagtcgaacgcttctcgcagttcaccttcatc
aagtccggtctgatcaccggtggcgaggacttcaaggtccaggccgcgatgctgcgcaag
gtgccagacgtactgatcggcacgccgggccggctgatcgagcatctcaatgccggcagt
ctgatcctcaaggatgtcgagattctggtgatcgacgaggccgatcgcatgctcgacatg
ggctttgccgaagacatgcagcgcctggtgggcgagtgcgaaaagcgccagcagaccctg
ctgttctctgccaccagcgggggcgccgggctgcgcgagatggtcgccaaggtgctgcgc
gatccgttgcacctgcagctcaaccgggtcagcgaactgaacgaggcgacccggcagcag
gtcatcaccgccgacgatgtggcacataaggaaaggctggtgcactggctgctggccaac
gagagctaccagaaggcggtcatcttcaccaatacccgcgcccaggccgaccgcctgtac
gggcacctggtggccagcgacatcaaggtcttcgtgctgcacggggagaaggaccagaag
gagcgcaaactggccatcgagcggctcaagcagggcggcgtgaaggtgctggtggccacc
gatgtggccgcccgtggcctcgatatcgaaggcatggacctggtgatcaacttcgacatg
ccgcgttcgggtgacgagtacgtgcaccgcatcggccgtaccgggcgcgccggcgccgaa
gggctggcgatctcgttgatctgccacaacgactggaacctgatgtccagcatcgagcgc
tacctcaaacagcgcttcgagaagcgggtgatcaaggggctgaaaggcacttatcagggt
ccgaagaacctcaaggcgtcaggcaaggccgctggcagcaagaagaaaaaggtcgacaag
aagaaaggagtggaaaagaagtccaagcctgccggcaagcgcccgaacggtgccaagcgg
gaggcgccatcacccgtggtcagccaggacggcatggcgccgctcaagcgcaagaagccc
gcagccgagtga
DBGET
integrated database retrieval system
