Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_3426
Help
Entry
PSTAB_3426 CDS
T01571
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSTAB_3426 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_3426 (recB)
Enzymes [BR:
psz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSTAB_3426 (recB)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSTAB_3426 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
AAA_30
EME1-MUS81_C
Motif
Other DBs
NCBI-ProteinID:
AEJ06707
UniProt:
F8GZR3
LinkDB
All DBs
Position
complement(3678342..3682022)
Genome browser
AA seq
1226 aa
AA seq
DB search
MTAENLNPLGFPLHGSRLIEASAGTGKTFTIALLYVRLVLGHGGDAAFKQALTPPQILVV
TFTDAATQELRDRIRARLNEAARCFQAAESSHDPLLVKLRDEYPADQWPTCARRLQLASE
WMDEAAVSTIHGWCYRMLREHAFDSGSLFTQTLETDQRELLEEVVRDYWRRQFYSVSPEF
AKVVTDCFKSPVELREALTPLLSRTDAEFRQEGVSITAPAKLDALLQVTADWNAKYAALE
ASARAAWAKDNVALEAMLHEARTSLNGNSYPAKSRETLDGMLLNIEAWSQGGEACDHVFK
CGQTRFKLKKGGSIPRHLAFEAIDALADHKATKQDIRAQLLLHALREVQGAFEEEKLRRA
QIGFDDLLNRLGRALQGPSGPRLAQTIRQQYPVALIDEFQDTDPVQYDIFDTIYRIGDNL
PDCGLFMIGDPKQAIYSFRGADIYTYLKAREATEGRHYTLGTNYRSTKAMVDAANHCFSF
AEAHPRAAFRFAKDGQNPVPFKGVDAKGRSDVLEIEGEQQKALTLWQLQTDGVINNATYL
REASEVCASAIQAWLDGSAPEPSGLRSSDGQLTKLKPADIAILVRSRTEAEAIRKALARR
KLASVYLSDRDSVFESEEAKDLLCILRACAQPSSDRLLRAALATRSVGLGWQALERLNQN
ELCWEELVQCFRVFRQHWQQQGVLPMLRKLLATFQVPARLLAEAQGERRLTNLLHLAEWL
QRSATELDGEHALIRHLAEQIEAQSEEEILRLESDSDLIKVVTVHKSKGLEYPLVMLPFA
CSARPVDGRSKTPPMFHEQQGEQYRLVLELGKGELAKPSQKLADDERMGEEMRLLYVALT
RARYATWICVAPKVAKTGEKSLDLHKSGLGYLLAGENKVAPERLAEVVEALAKGCDDIAV
SKAPTPTQTVHTAPARSTAGPALRPLHALAANWWIASYSALAIADDRTLVGATSPIAPEP
ATALEANLQEQDDEQNPSAGVGIHGFPRGAGPGTFLHGLFEWAGDEGFGNAASDEQALHD
AVARRCNLRGWERWIDPLSAWLSHYLKAPLRFNGTQCTLAALDTYQVEMEFWFASQNVSV
ERLDALVREHTLGGVPRPALAPSQLNGMFKGFIDLTFEHEGRYYVADYKSNWLGSTDCAY
AAEAMAETMLGKRYDLQMCLYLLALHRQLKLRLPGYDYDQHMGGALYLFIRGHQAPTHGL
HFERPPRQLIEQLDQLFMGQHLEASA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggaaaacctcaaccccctcggtttccccctgcacggcagccgcttgatcgag
gcgagcgcgggcaccggtaaaaccttcaccatcgccttgctgtatgtgcgcctggtgctg
ggccatggcggcgacgcggcgttcaagcaagcgctgacgccaccgcaaattttggtagtg
accttcaccgacgccgccacccaagagctgcgcgaccgcattcgcgcacgcttgaacgag
gctgctcggtgcttccaggcagccgaatcgtcccatgacccgctgctggtgaaactgcgt
gacgagtaccccgccgaccagtggccgacctgtgctcggcggttgcagttggccagcgag
tggatggacgaagcggcggtttcgaccattcatggatggtgctaccggatgctgcgcgag
cacgccttcgacagcggcagcttgtttacccaaacactggaaaccgaccagcgcgagttg
ctcgaggaagtggtcagggactactggcgccggcagttctatagcgtgtcgcccgagttt
gccaaggtggtgacggattgcttcaaaagccctgtcgagctgcgcgaggcattgacgccg
ctgctgtcgcgtaccgatgccgagtttcggcaagagggtgtatcgatcacggcacccgcg
aaactggatgccttgcttcaggtaaccgccgactggaatgccaagtacgccgcgctcgaa
gcgtcggcgcgcgccgcgtgggccaaggacaacgtagcgttggaggccatgctgcacgag
gcccgcacctcgctgaacggtaactcctaccccgccaagagccgcgaaactctggacggg
atgctgcttaacatcgaggcctggagccagggcggcgaagcctgtgaccacgtgttcaag
tgtgggcagacccgcttcaagctaaaaaagggcggcagcattcccaggcacctggcgttc
gaggccatcgatgcgttggccgaccacaaggccaccaagcaggacattcgcgcgcagttg
ctgctgcatgcactgcgtgaagtgcagggtgccttcgaggaagaaaaactgcgccgggcg
cagatcggattcgacgatttgctcaatcgcctcggccgtgcgctgcaaggaccatctggg
ccgcgcctggcgcagaccattcgccagcagtacccagtggccttgatcgacgagttccag
gacaccgacccggttcaatacgacatcttcgacaccatctaccgcatcggcgacaacctg
cccgactgcgggctgttcatgatcggcgacccgaaacaggcgatctattccttccgtggc
gccgacatctacacctacctaaaggcgcgtgaggctaccgagggccggcattacaccctg
ggcaccaactaccgttccaccaaagctatggtcgatgccgccaaccactgtttcagcttc
gccgaagcgcacccgcgagcggcgttccgcttcgccaaggacgggcagaacccggtgccg
ttcaagggcgtcgacgccaaaggccgcagcgatgtgctggaaatcgagggcgaacagcag
aaggccctgactctttggcaactgcagaccgacggcgtcatcaacaacgccacgtacctg
cgcgaggcctctgaggtgtgcgcctcggcgattcaggcctggctcgacggtagtgcgccc
gagccctcgggcttgcgcagcagcgacggccagttgaccaagctcaaacccgccgatatc
gccattctggtacgcagccgcacggaagccgaagccattcgcaaggccctcgcacgtcgc
aaactggccagcgtctatttgtctgaccgcgactcggtgttcgaaagcgaagaggccaaa
gacctgctgtgcatccttcgggcctgcgcccaacccagcagtgaccgcttgctgcgtgcg
gcactggcaacccgcagcgtgggccttggctggcaggcgctggagcgcctgaatcagaac
gagctgtgctgggaagagcttgtgcagtgcttccgcgtgtttcgccagcattggcagcaa
caaggcgtgctgccaatgctgcgtaagctgctcgcgaccttccaggttccggcccggttg
cttgccgaggcgcagggcgaacgtcgcttgaccaacctgctgcacctggctgaatggctg
caacgcagcgccactgagctggacggcgagcacgcgctgattcgccacttggccgagcag
atcgaggcgcagagcgaagaagaaattctgcgcctggaaagcgactcagacctgatcaag
gtggtgactgtgcacaagtccaagggccttgagtaccccttggtgatgttgccgttcgcg
tgcagcgccaggccggtggatggccgcagcaaaacgccgcccatgttccatgagcagcag
ggtgagcaataccgcctggtgcttgaattgggcaaaggcgagttggcgaagccgtcgcag
aaactggccgacgatgagcgcatgggcgaggaaatgcgcctgctgtatgtcgccctgacc
cgcgcccgctacgctacctggatttgcgtggcgcccaaggtggctaaaaccggggaaaaa
tcgctcgacctgcacaagtcgggcctgggctacctgctggcaggcgaaaacaaggtggcg
cccgagcgcctggctgaagtggtcgaggcactggcaaagggctgcgacgacatcgccgtg
agcaaggcgcccacgcccacccaaaccgtccacacagcgcccgcccgatccaccgcaggc
ccagccttgcgcccgctgcatgcgctggcagccaattggtggatcgccagctactccgcc
ttggcgatcgccgacgaccgtaccctggtgggcgccacttcgcccatcgccccagagcct
gcaactgccctagaagccaacctgcaagagcaggacgacgagcagaacccgtctgccggc
gttggcattcacggcttcccccgaggggcggggccgggcaccttcctgcacgggttgttc
gagtgggcgggcgatgagggcttcggcaacgccgccagtgatgagcaagccctgcacgac
gccgtggcacggcgctgcaacctgcgtggctgggaacgctggatcgacccgttgtcggcc
tggctcagccactacctgaaggcgccactgcgcttcaacggcacccaatgcaccctcgca
gcgctggacacctaccaggtcgagatggagttctggttcgccagccaaaacgtgagcgtc
gagcgcctcgatgccctggtgcgtgaacacaccttgggcggcgtgccacggccagcgctc
gccccaagccagttgaacggcatgttcaagggcttcatcgacctgaccttcgagcacgag
ggccgctactacgtggcggactacaagtccaactggctgggcagtaccgactgcgcctat
gccgccgaggccatggccgaaaccatgttgggcaaacgctacgacctgcagatgtgcctg
tacctgctggccctgcatcgccagctcaagctgcgcctgcccggctacgactacgaccag
cacatgggtggcgcgttgtacctgttcatccgtgggcaccaggcgcccacccatggcctg
cacttcgaacgcccaccgcggcaattgatcgagcagcttgaccaactcttcatggggcaa
cacctggaggccagcgcatga
DBGET
integrated database retrieval system
