Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_3724
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Entry
PSTAB_3724 CDS
T01571
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03030
DNA replication
psz03430
Mismatch repair
psz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSTAB_3724 (holA)
03430 Mismatch repair
PSTAB_3724 (holA)
03440 Homologous recombination
PSTAB_3724 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psz03032
]
PSTAB_3724 (holA)
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_3724 (holA)
Enzymes [BR:
psz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSTAB_3724 (holA)
DNA replication proteins [BR:
psz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSTAB_3724 (holA)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSTAB_3724 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AEJ07005
UniProt:
F8H2E9
LinkDB
All DBs
Position
4011264..4012295
Genome browser
AA seq
343 aa
AA seq
DB search
MKLSPAQLGKHLQGSLAPVYVVCGDEHLLCQEACDAIRAATRAQGFSERQVFHVETGFDW
GQLIEAGASLSLFAEKRLIELRIPNGKPGDKGAAALLDYLARPADDTVLLISLPKLDGST
QKTKWAKALIEGKDVQFLQIWPVDAAQLPQWIRQRLAQVGLSADQEAVELIAARVEGNLL
AAAQEIEKLKLLADAGQISADTVQAAVTDSARYDVFGLIDAALQGQAAHALHMLEGLRGE
GVEAPVILWALARELRLLANISQQYGQGVPLDRAFSQARPPVWDKRRPLVSKALQRHDAA
GWSRLLMAAQRIDEQIKGQAEGDPWIGLANICLQLSGRRLGAG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctcccccgcccaactcggcaagcacctgcaaggcagtctcgcgcccgtctac
gtggtctgtggcgacgagcatctgctgtgccaggaagcctgcgatgcgattcgcgcggct
actcgcgcacaggggttcagtgagcgccaggtctttcatgtcgagaccggcttcgactgg
ggccagctcatcgaggctggcgccagcctgtcgctgttcgcggaaaaacgcctgatcgag
ttgcgcattcccaacggcaagccaggggacaagggcgccgcggcgctactggactacctg
gcgcgcccggccgacgacacggtgctgttgatcagcctgcccaagcttgatggcagtacg
cagaagaccaagtgggccaaggcgctgatcgaaggcaaggacgtgcaattcctgcagatc
tggccggtggatgccgcgcagctaccgcaatggatccgccagcgattggcccaggtcggc
ctgtccgctgaccaggaagccgtcgagctgatcgccgcgagagtcgaaggcaatctgctc
gccgccgcacaggaaatcgagaagctgaaactgctggccgacgccggccagatcagcgcc
gataccgtgcaagccgccgtcaccgacagcgcccgctacgacgtcttcggcctcatcgac
gcggcgctccaggggcaggccgctcatgcgctgcacatgctcgagggcttgcgcggcgag
ggcgtggaggcaccagtgatcctctgggcattggcgcgcgagctgcgcctgttggccaac
atctcccagcagtatggtcagggcgttccgctcgatcgcgccttcagccaggctcgccca
ccagtctgggacaaacgacgcccgttggtctccaaggcactgcaacggcacgacgccgca
ggctggagccgcttgctgatggctgcacagcgcatcgacgagcagatcaagggccaggcc
gaaggcgacccctggatcgggctggccaatatctgcctgcagctaagcggccgccggctg
ggcgccgggtga
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