Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_3859
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Entry
PSTAB_3859 CDS
T01571
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03030
DNA replication
psz03430
Mismatch repair
psz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSTAB_3859
03430 Mismatch repair
PSTAB_3859
03440 Homologous recombination
PSTAB_3859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psz03032
]
PSTAB_3859
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_3859
Enzymes [BR:
psz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSTAB_3859
DNA replication proteins [BR:
psz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSTAB_3859
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSTAB_3859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEJ07140
UniProt:
A0A0H3Z5M5
A0A4P1S8H5
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All DBs
Position
4166353..4167060
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AA seq
235 aa
AA seq
DB search
MSMFWFNPRGPKLPPEQQQRVAELPRPELPQPVPLRQQRLVVLDLETTGLHLKRDLVIAI
GAVVIEDGAIDYSQQFECTLCRQVKVNESVLIHGIAPSELANGLPPAEALLSFMEFAAGS
IVLAFHAPFDQRMLGRALKNELGYSLENSFLDVADLAPMLFPEAMIHRGSLDHWLDYFNI
HIPQRHNASADAMATAEIALILLNRAQRIGLTTFDELAQRLRCWQRARKAAFNSI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttctggttcaacccacgcggtccgaagttgcctcccgagcagcagcaacgc
gttgccgagctgccgcgcccggaactgccgcagcccgttccgctacgccagcaacgactg
gtggtgctggatctggaaacgaccgggctgcacctcaagcgcgacctggtcatcgccatc
ggcgcggtggtcatcgaggacggcgcgatcgattattcgcagcagttcgaatgcacgctg
tgccgtcaggtcaaggtcaatgaaagcgtgctgatccatggcatcgcgcctagcgaactg
gccaacgggctgccgccggccgaagcgctgctcagcttcatggagtttgccgcgggcagc
atcgtcctggcctttcacgccccgttcgaccaacgcatgctgggccgcgcgctgaagaac
gagctgggctattcgctggagaacagcttcctcgacgtggccgacctggccccgatgctg
ttccccgaagcgatgatccaccgcggcagcctggaccactggctcgactacttcaacatc
catatcccgcagcgtcacaatgcgtccgccgacgccatggcgacagccgagatcgcgctg
atcctgctcaatcgtgcccagcgcatcggcctgaccaccttcgacgagctggcgcagcgc
ctcaggtgctggcagcgcgcccgcaaggccgcattcaattcgatctga
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