Stutzerimonas stutzeri ATCC 17588 = LMG 11199: PSTAB_3994
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Entry
PSTAB_3994 CDS
T01571
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
psz
Stutzerimonas stutzeri ATCC 17588 = LMG 11199
Pathway
psz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSTAB_3994 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psz03400
]
PSTAB_3994 (recB)
Enzymes [BR:
psz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSTAB_3994 (recB)
DNA repair and recombination proteins [BR:
psz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSTAB_3994 (recB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
ResIII
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AEJ07275
UniProt:
F8H5R9
LinkDB
All DBs
Position
complement(4314032..4317580)
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AA seq
1182 aa
AA seq
DB search
MKLDLLDSPFDGRSLIEASAGTGKTWTLTALYARLLLERQLSVGQILVVTYTTAATAELR
ERIRARLADLLAVYEGTPSSDDFLNRLHARYPDDASRRRLLLAVHGFDEAAIFTIHGFCQ
RALQDAAFEAGGDFDSELTADDREIIDALLADAWRSELADADPAWARFLAKSRITPQWLR
QRLRSHLGKPYLRVEPQGVPVAADLRPVEAAWQRAAELWKQAGSAWVAELLAHGGLSQST
HKRIKFAPWQAELDAYFADPAVMFDLPEGAAKFGARALSKACKKGFDAPVCELAQALDEL
ADQVADALPAGKQRLIALQVALLERLNRELPERKAAQRLLAFDDLLNRLDQALQGPVGED
LAASLRATYPLALIDEFQDTDPIQYAIFNRIYAKGRDASLCFVGDPKQAIYAFRGADLAT
YMTAKQQADREPFNLPTNYRSTPELIAALNQLFDHPQPFAQPDLRYPPVGAADKPRASLR
LAEEGKAAPLSLVWLGDDPLGKAEAAQLTASDTARRIAVQLAAAAEGRAGFDKDGGFAPL
QGGDIAVLVANHRQAGMIADELAARGVPSVRRGRDSVWRSEEAGELAAVLAAYAEPGREG
LLRHALATRLLGRSAADLARCQDDQHEWDAEREAAERYHQLWQQQGFMRVFRAWLDEQAV
AERLLARVDGERRLTNLLHLGELLQAESLLRPGLEPLLAWFNAQRGSEGAGEEALLRLES
DAERVQIVTIHTSKGLEYPLVFCPFLWDGKLLGKNQDSARCHDADGQPLLDLGSGELEDN
LERARQEVFAEQLRLAYVALTRARDRLWLHWGPVSLPKAKKDGNLPDEGLHSSALAWLLH
GRELPGEQPLTELGNHLAGLNGGSLRLAIERLVAASDGRMACLPLESREASTQGSSRAAP
PEQLAQLNRSLYSAWRIGSFSGLAAGMHMEAPDRDALAMPDAGEPGSGFFAFPRGARAGT
CLHAILENWARGKGELDALVEPALKAYGLPLEWKEIAISHLQKVLETDMDGAGLTLAALK
SARRLPELGFTFPVRDLDVARLRALLTDPANGLAAPLREAAARLEFDSLKGFLKGFIDLT
FEHGGRWYIADYKSNWLGPDASYYGGERLLQALAGEHYYLQYLIYLVALRRFLRQRLADF
RDEQLGGAFYLFLRGMPEAGVYFARPDDALLDALDRLFEEGR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgacctgctcgactcgcccttcgacggccgctcgctgatcgaagccagcgcc
ggtaccggcaagacctggacgctcaccgcgctctatgcgcgtctgctgctggagcgccag
ctttcggtggggcagattctggtggttacctacaccaccgccgccaccgccgagctgcgc
gagcgcatccgcgcgcggctggccgatctgctggcggtttatgagggcacgccgagcagc
gatgactttctcaatcgcctgcacgcccgctacccggacgacgcctcgcggcggcgcctg
ttgctggcggtgcacggcttcgacgaggcggcgatcttcaccatccacggcttctgccag
cgcgccctgcaggatgccgccttcgaggccggcggcgatttcgacagcgagctgactgcc
gatgaccgcgagatcatcgacgcgctgctcgccgacgcctggcgtagcgagctggccgat
gccgacccggcctgggcacgcttcctggccaagagccggatcactccgcagtggttgcgc
cagcggctgcgcagtcatctgggcaagccctatctgcgggtcgaaccgcagggcgtgccg
gtcgcggccgatctgcgcccggtcgaggcggcctggcagcgggctgccgagttgtggaag
caggcgggtagcgcctgggtcgccgaattgctggcacatggcgggctcagccagagcacg
cacaagcgcatcaagtttgcgccatggcaggcggaactggatgcctattttgccgatccg
gcggtgatgttcgacctgcctgagggcgcggcgaagttcggcgcgcgcgcgctaagcaag
gcctgcaagaagggcttcgacgcgccggtgtgcgagctggcccaggccctggacgagctg
gccgatcaggtggccgacgcactgccggccggcaagcagcggctgatcgcccttcaagtg
gcgctgctcgagcggctcaaccgagagttgcctgaacgcaaggcggcgcagcggctgctg
gccttcgacgacctgctgaatcgtttggatcaggcactgcaaggcccggtcggcgaggac
ctggcggcatcgctgcgtgcgacctatccgctggcgctgatcgacgagttccaggacacc
gacccgattcagtacgccatcttcaaccgcatctatgccaagggccgtgatgcctcgctg
tgcttcgtcggcgatcccaagcaggcgatctacgccttccgcggtgcggacctggccact
tacatgacggccaagcagcaagccgatcgtgagcccttcaacctgccgaccaactaccgc
tcgacgcccgagctgatcgccgcgctcaaccagctgttcgaccatccgcagccgttcgcc
caacccgacctgcgctacccaccggtgggtgccgccgacaagccgcgtgcgagcctgcgt
ctggcagaggagggcaaggcggcgccgctgtcgctggtctggctcggcgacgatccgctg
ggcaaggccgaggccgcgcaactgacggcgagcgacacggcgcgacgcatcgccgtgcag
ctggccgccgccgccgagggacgcgcaggtttcgacaaggatggcggcttcgccccgctc
cagggcggcgatatcgccgtgctggtggccaatcaccgccaggccgggatgatcgccgac
gagctggccgcgcgtggcgtgcccagcgtgcgccgcgggcgcgacagcgtctggcgcagc
gaggaggcgggtgagctggccgcggtgctggccgcctatgccgagccgggacgcgagggt
ctgctgcggcatgccctggcgacgcgcctgctgggccgcagcgccgccgatctcgcccgc
tgccaggatgaccagcatgaatgggacgccgagcgcgaagccgccgagcgctaccaccag
ctctggcagcagcagggcttcatgcgcgtgttccgcgcctggctcgacgagcaggcggtg
gctgaacgcctgctggcgcgggtcgacggcgaacgtcggctgaccaacctcttgcacctc
ggtgaattgctgcaggccgagagcctgctgcggcccgggctcgagccgctgctcgcctgg
ttcaacgcccagcgcggcagcgaaggcgccggtgaagaagcgctgctgcgcctggaaagc
gatgccgaacgggtgcagatcgtcaccatccacaccagcaaggggctggaatacccgctg
gtgttctgcccgtttctctgggacggcaagctgctcggcaagaaccaggacagtgcccgt
tgtcacgatgccgatggccagccgctgctggacctgggcagcggcgaactggaggacaac
ctcgaacgcgcccgccaggaggtgttcgccgaacagctgcggctcgcctacgtcgccctg
acccgcgcccgtgaccggctctggctgcactgggggccggtgagcctgcccaaggcgaag
aaggatggcaatctgcccgacgaaggcttgcacagcagcgccctggcctggctgctgcac
ggccgcgaactgccgggcgagcagccactgacggagctgggcaaccacctggctggcctc
aacggcggtagcctgcgtctggccatcgagcggctggtcgctgcgagcgacgggcgcatg
gcctgcctgccgctcgagtcgcgtgaggccagcacccagggcagcagccgcgcagcgccg
cccgagcagctggcgcagctcaaccgcagcctctacagcgcctggcgcatcggcagcttc
tccgggctggccgccggcatgcacatggaagcgccggaccgcgacgccctggcgatgccc
gatgccggcgagccgggcagcggcttcttcgccttcccacgcggcgcgcgggccggtacc
tgtctgcatgccatcctcgagaactgggcgcggggcaagggcgagctggatgcgctggtc
gagccggcgctcaaggcctacggcctgccgctggaatggaaggagatagccatcagccac
ctgcagaaggtgctggaaaccgatatggatggcgccggcctcaccctcgccgcgctgaaa
tcggccagacgcctgccggaactgggctttaccttcccggtgcgggatctggacgtggcg
cgcctgcgcgccttgctgaccgacccggccaacggactggccgcaccgctgcgcgaggcc
gcagcgcggctggaattcgacagcctcaagggctttctcaaaggctttatcgacctgacc
ttcgagcacggcggccgctggtacatcgccgactacaagtccaactggctcggcccggac
gccagctactacggcggcgagcggctgctgcaggcgctggccggcgagcattactacctg
caatacctgatctatctggtggcgctgcgccgcttcctgcgccagcgcctggcggatttt
cgcgacgagcagctgggcggcgccttctacctgttcctgcgcggcatgcccgaggccggc
gtctacttcgcgcggccggacgatgcgctgctcgatgcgctggatcgactgttcgaggag
ggacggtga
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