Paenibacillus terrae: HPL003_00060
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Entry
HPL003_00060 CDS
T01668
Name
(GenBank) ribonuclease, rne/rng family protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pta03019
]
HPL003_00060
03009 Ribosome biogenesis [BR:
pta03009
]
HPL003_00060
Messenger RNA biogenesis [BR:
pta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPL003_00060
Ribosome biogenesis [BR:
pta03009
]
Prokaryotic type
rRNA processing factors
HPL003_00060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-ProteinID:
AET56798
UniProt:
G7VT08
LinkDB
All DBs
Position
complement(16037..17221)
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AA seq
394 aa
AA seq
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MKQMIVQCQQQMTQMALLEEGRLVEYAAELPRKRGILGSFFKARVVNVLPGMQAAFVDIG
QRKNAFLYVDDVLHAHLDKQPEVKPSISELLKVGQEIVVQVLKEAVGSKGARVTTHFSLP
GRWIVYMPRADYVAVSKKIEREGERARLKAMGEQLRTGEEGVIIRTVSEEMSREAIENDL
NQLRQQWKVIQRKATEHSAPCELHRDLSIVQRLIRDVFTPEQDELIIDSEEQAKEAEILL
RQIGPEKAHVSIFRGADETIFKAYGVHEQLERDFARKVWLQGGGYIIIDHTEALTVIDVN
TGKFTGGSNLEETVTRTNIEAAEEIARLVRVRDIGGIIIIDFIDMEQEENRREVSSVLES
RMKKDRTKSYVVGWTRLGLLEMTRKKVREEKTIL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatgattgtacaatgccagcagcaaatgacccaaatggcactgttggaagag
ggacgattggtagaatatgcagctgaattgccgcgaaagcggggaattctgggttccttt
ttcaaagccagagttgtcaatgtactaccgggaatgcaagccgcctttgttgacattgga
cagcgaaagaatgcctttttatatgtggatgacgtacttcacgcccatttggataagcaa
cctgaggtgaagccgtccatttccgagctgttgaaggtgggacaggaaattgtagtacag
gtgttgaaagaggccgtgggtagcaaaggggccagagtaaccactcatttttcacttccg
ggtcgctggattgtatacatgcctcgcgccgattatgtggctgtatccaaaaagatcgag
cgtgagggagaacgggctcgcctgaaagcgatgggagagcagcttcgaacaggtgaagaa
ggagtcattatccgtacagtttcggaggaaatgagcagagaagcgattgaaaatgacctg
aaccagttgcgtcagcaatggaaagtcattcagcgtaaagctactgaacactcggctcca
tgtgagctgcaccgggatttgagcatcgtccagcgtttgattcgggatgtgtttacaccg
gagcaggatgagctgattattgacagtgaggaacaggcaaaagaagcggaaatattacta
cgtcaaatcggtccggagaaagctcatgtgagcatatttcgaggtgcagatgagaccata
tttaaagcctatggcgttcatgagcaactggaacgtgattttgcgcgaaaagtatggctt
cagggcggcggatatattatcatcgaccatacagaggcactgaccgtcattgatgtgaac
acagggaaatttacggggggcagcaatctggaagagacggtgacccggactaacatcgaa
gcggccgaagagattgcccggttggtgcgtgtacgtgatatcgggggcattatcatcatt
gattttattgacatggaacaagaggagaatcgccgtgaagtgtcctctgtgctggagtca
aggatgaaaaaggaccggaccaaatcatatgtcgttggctggactcggctaggtcttctg
gaaatgactcgaaaaaaggtgcgtgaggagaagacgattttataa
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