Paenibacillus terrae: HPL003_00140
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Entry
HPL003_00140 CDS
T01668
Name
(GenBank) RNA pseudouridine synthase (RNA-uridine isomerase)
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pta03009
]
HPL003_00140
Enzymes [BR:
pta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPL003_00140
Ribosome biogenesis [BR:
pta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPL003_00140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AET56814
UniProt:
G7VT24
LinkDB
All DBs
Position
complement(34054..34965)
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AA seq
303 aa
AA seq
DB search
MSWQGGWKRRGPWLEVTPGREITEGEHCTDAVDHWLLNRLELPDKLWRRLRHEKQIEFAG
DRLRLALFPVTNLGVTPRWYDLKVLYEDDFCLVAHKPAGMAVHPDGAVKEGPLTLDHAVA
SYYEMNGIHAAVRHVHRLDTDTTGPVLYAKNEFALLKLDEQMRTKDMGRRYVALVRGEVP
SSLRMLDWPIGKDRHHKQRRRVSPTGQSAVTHVELGEVWGSGQKAVSLVYLTLETGRTHQ
IRVHLSHAGYPLLGDVLYGGRAADFGRQALHGERLTFRHPLSGETITVEDAWPDDFQKLH
QQL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcaaggtggctggaaaagacggggaccgtggctggaagtcacaccaggacgg
gaaatcacagagggtgagcattgcaccgatgctgtagatcattggttgctgaatcgtttg
gagctaccggacaagctgtggcgcagactgcgacacgaaaagcagattgaatttgcgggg
gaccggctgcggctggccctttttcccgttacgaaccttggcgtgacccctcgctggtac
gatttgaaggtgctgtatgaggatgatttttgcctggtcgcacacaaacctgcgggtatg
gcggtacatccggacggagctgtaaaagagggtccactgacgttggatcatgcggtcgca
tcgtattatgagatgaatggcatccatgcggcagtacggcatgtgcatcgtctggataca
gatacgacaggcccggtactgtatgccaaaaatgaattcgcgttgctcaagctggacgag
cagatgcggaccaaggatatgggtcgccgttatgtggctttggtacggggggaagtccct
tcatcactacggatgctggattggccgattggcaaggacaggcatcacaagcagcgtcgc
cgtgtttctccgactggacagagtgcggttacccatgtggaacttggtgaagtgtggggg
agcggtcaaaaggcggtgagcctcgtatatttaacactagaaacaggccgaacgcatcag
attcgcgttcatcttagccatgcgggctatccgttattgggggatgtattatacggggga
cgagctgctgattttggcaggcaggcgctgcacggagagcgtcttaccttccgtcatccg
ctaagcggtgaaacgattactgtggaagatgcttggccggatgattttcaaaagctgcat
caacagttgtaa
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