Paenibacillus terrae: HPL003_03935
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Entry
HPL003_03935 CDS
T01668
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pta
Paenibacillus terrae
Pathway
pta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPL003_03935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pta03021
]
HPL003_03935
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_03935
Enzymes [BR:
pta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPL003_03935
Transcription machinery [BR:
pta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPL003_03935
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPL003_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AET57560
UniProt:
G7VTR1
LinkDB
All DBs
Position
complement(791545..795159)
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEYMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGDTPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DLDIDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNQPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSAEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASGNIL
NPKDGKPVVTPSQDMVLGSFYLTMDNKEEEGSNMILRNMNEAISAYQRGTAGLHARVAIP
VKALNKTSFTEKQQDAMLITTVGKIIFNEIFPASFPYINDATRANLLYGTAEEFFVYEKG
VNLTEAIQNAPQAGGVGKDYLGNIIARCFETYHTTETAVILDKIKQLGFTYSTRAGVTVA
VSDVIVPVEKQEILKGSEDKAQVVTNQYRRGLITNEERYDRIIDIWSKAKDDITEVLMKS
MDRYNSIMMMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRLEGRYCFETVRHPETGEILASRNELIDSDKAEAIVKAGVQKVQIRSVLSCRAKHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGTVKEVREGKDRREIDIQGEAETKTYSVTYGSRLRVSEGMTVEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
LDAGNTTLLPGSFVDVHEYENANKTAILSGQEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDQLLGLKENVIIGKLIPAGTGMNRYRSVKFAQPEGEQSSSEELEP
ISAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaatttcgaatatatgaaaatcgggcttgcttcccccgaaaagatt
cgttcttggtcccgcggagaagtcaaaaaaccggagacgattaactatcgtacgcttaaa
ccggaaaaagaaggactattttgcgagaaaattttcggacctacgaaagactgggaatgt
cattgcggtaagtacaaacgcgtgcgctataaaggtgttgtctgtgaccgttgtggcgta
gaggttacccgtgctaaggttcgtcgtgaacgtatgggtcacatcgagctggctgcccct
gtatcgcatatttggtactttaaaggcattccgagccgtatgggtcttgctcttgatatg
tctccaagatctctggaagagatcatttacttcgcatcttatgttgtaactgatccagga
gatacgccattggagaaaaagcaacttctgtccgagaaagaataccgcagctaccgtgaa
aaatacggctacggattccaggcaggtatgggtgctgaagcggttaagaagctccttcaa
gatttggatatagacaaagaactggaattcctgaaagaagagctgcgtacagctcaagga
caacgccgcaaccgtgcgatcaagcgtcttgaagtaattgaggcgttccgtaactccggt
aaccagccggactggatgatcatggacgtgctgcctgttattcctccggagcttcgtccg
atggtacagttggatggtggacgttttgctacctctgacctgaatgacttgtaccgccgt
gttattaaccgtaacaaccgtctgaaacgcctgctagatctgggtgctccagatattatc
gtacaaaatgaaaaacggatgctgcaggaagctgttgacgccctgatcgataatggtcgt
cgtggccgccctgttacaggtccgggtaaccgacctttgaaatccctcagccacatgctg
aaaggtaaacaaggacgtttccgtcaaaacttgcttggaaaacgtgttgactactccggt
cgttccgttatcgttgtaggtccgtacttgaaaatgtaccaatgcggtttaccgaaagaa
atggcattggaactgttcaagccttttgtcatgaaagaacttgtgaacaaaggccttgca
cacaacattaagagcgcgaaacgtaaagtagagcgcgtgagcgcagaagtatgggatgtg
ctcgaagaagtaatcaaggagcacccggttcttctgaaccgtgcccctacgctgcataga
ctcggtattcaggcgtttgaaccgattttggttgaaggtcgcgcaatccgtttgcatccg
ctcgtatgtacggcatacaatgccgactttgacggtgaccaaatggcggttcacgttccg
ttgtctgcagaagcccaagcagaagctcgtttgctcatgctggcctctggtaacattttg
aatccgaaagacggcaagccagttgttactccttcccaggatatggtccttggttctttc
tatctgactatggataacaaagaagaagaaggcagcaacatgatccttcgcaacatgaac
gaggctatatcggcttaccagcgcggtacagcgggtcttcatgctcgtgtagctattccg
gttaaagctttgaataaaacgagctttacggaaaaacaacaggatgcaatgctgatcacc
acggttggtaaaattatcttcaatgaaattttcccggccagcttcccgtacatcaatgat
gctacccgtgcaaacctgctttatggtactgctgaggagttctttgtttacgagaagggt
gtaaaccttacagaagcgattcaaaatgctccgcaagctggcggggtaggtaaggattat
cttggtaacattattgcccgttgctttgaaacttaccatacaacagaaacagctgtgatt
ttggataaaatcaagcagcttggctttacgtattctactcgtgcaggtgtaactgttgct
gtatcggacgttatcgtgccagtggaaaaacaagaaattcttaaaggttctgaggataaa
gcgcaagtcgtaacgaatcaataccgtcgtggtctgattacgaacgaggaacgctatgac
cggattattgatatttggtccaaagcgaaagatgatattaccgaagtgttgatgaagtcc
atggatcgctataactccatcatgatgatggttgactccaaagcacggggtaacaaatca
cagattacccagctcggtggtatgcgtggtctgatggcgaatccatccggtcgtattatc
gagcttccaattaaatcgaacttccgtgaaggtctgacagtactcgagtacttcatctcc
actcacggagcgcgtaaaggtttggcggatacagcacttcgtacggctgactccggttac
ctgactcgtcgtcttgtcgatgtggcgcaggatgttatcgtgcgtgaagaagactgtggt
acggacaaaggctttacagtaagccgtattcaggacggtaaagaagttattgaggacctg
tatgaccgtctggaaggtcgctattgctttgaaacagtacgtcatccggagactggtgag
attttggctagccgtaacgaattgatcgattctgacaaagctgaagcaattgttaaagca
ggtgtacaaaaggttcaaattcgttctgtactgagctgccgtgctaaacatggcgtctgc
aagaaatgctacggtcgcaatctggctactggtaaacacgttgagattggtgaagcagtt
ggtattatcgcggcacaatccatcggtgaaccaggaacccagcttacaatgcgtacattc
catacaggcggtgtagcgggcgacgacattacacaaggtttgccgcgtattcaggagctt
ttcgaagcacgtaatcctaaaggtcaggcaaccatcagtgaaattgacggtacagttaaa
gaagttcgtgaaggtaaagatcgccgtgagattgacattcagggtgaagctgaaacgaaa
acttattcggttacgtatggttctcgtctgcgcgtaagcgaaggcatgactgttgaagcc
ggggatgaactgacagacggttcaatcgaccctaaagaaatgctgcgcattaaaggtatt
cgcggggtacagaactatatccttcaggaagttcaacgcgtatatcgtaatcagggtgta
gaaatcaatgataagcacgtggaagttatgattcgtcaaatgctgcgtaaaatccgtatc
cttgatgcggggaatacaacgctgcttccaggctcctttgttgatgtgcacgagtatgaa
aatgcgaacaagacagcgattctcagcggccaagagccagcggtagccaaaccggttctg
cttggtatcaccaaggcatctctggaaactgactccttcttgtcagcagcttccttccaa
gagaccacacgcgtgctgaccgatgcagctataaaaggcaaagtcgatcagttgcttggt
ctgaaagagaacgttattattggtaagttgatccctgcaggtacagggatgaaccgttac
cgcagtgtgaaatttgcccaaccagaaggggagcaatcctcgtccgaagaactcgaaccg
atttcggccgagtaa
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