Paenibacillus terrae: HPL003_04085
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Entry
HPL003_04085 CDS
T01668
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pta
Paenibacillus terrae
Pathway
pta03420
Nucleotide excision repair
pta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPL003_04085
03430 Mismatch repair
HPL003_04085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_04085
Enzymes [BR:
pta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPL003_04085
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPL003_04085
MMR (mismatch excision repair)
Other MMR factors
HPL003_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
Terminase_6N
ResIII
GBS_Bsp-like
Motif
Other DBs
NCBI-ProteinID:
AET57590
UniProt:
G7VUI3
LinkDB
All DBs
Position
complement(830873..833197)
Genome browser
AA seq
774 aa
AA seq
DB search
MQSIDIHEAVARLNPPQRQAVEAIDGPLLIMAGAGSGKTRVLTHRIAYLIATRKTAPWGI
LAITFTNKAAREMQDRVSKLIGPQGRDVWVSTFHSMCVRILRRDIERIGFTSNFSILDST
DQLSVIRSCMKDLNIDTKKFEPKAVQSMMSTAKNELVTPEMYERKIGDYFEGIVAKVYTK
YQQRLKNNNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCKML
ADKHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEARTILLEQNYRSTSNILNAANEV
IGQNTGRKPKKLWTDKEGGAKIKVYRADSEHDEGYFIASEIHKNINAGKTYSHHAILYRT
NAQSRVVEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLIRIINVPKR
SIGDTTVGKLQAAAAERGVSIFRVLQVVDDLGFAGRTRNALVEFYDMIEGLSRMVDYLSV
TELTEKMLETTQYRLELQNENTLESRSRLENIDEFLSVTMEFEKGAEDKSLVSFLTDLAL
IADIDSMNDDEEEQSDAVVLMTMHSAKGLEFPIVFIVGMEEGVFPHSRAFLDNEELEEER
RLAYVGITRAEEQLFLTCAQMRTLFGRTTANPPSRFLEEIPDELKEDTIIKKDRYRRSGN
VGGSYGGRGLGKSSGSNFGGERSFDTMSRSGSSASASPRVTVTTSSSAKPTPAASAGGPS
IFAAGDKVQHGKWGIGTIVAVKGTGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatagatatacacgaggctgtagcccgcctcaatccgcctcagcgtcaggca
gtggaggcgatagacggaccgttgctgattatggctggcgcaggtagtggaaagacccga
gtgctcacgcaccggattgcctacctcattgcgacccgtaagacggctccatggggcatt
ttggcgattacctttacgaacaaggccgcgcgtgaaatgcaggatcgcgtatccaagctg
attggcccgcagggaagagatgtgtgggtatccacctttcactccatgtgtgtgcgtatt
ttgcgtcgggatatcgagcggatcggatttacctccaatttcagtattctcgattctaca
gatcagctgtctgtcattcggagctgtatgaaggatctgaacatagacaccaaaaagttc
gaacccaaagccgttcagtccatgatgagtacggctaaaaatgaactggtcactcctgaa
atgtatgagcgcaagattggcgattattttgagggaattgtggcgaaggtatataccaaa
taccaacaacgtctcaaaaacaacaactcgctggattttgatgatctgattatggcaacg
attcaactatttaaagaagtacctgaggtactggatttctatcagaagaaattccaatac
attcatgtcgatgaatatcaggatacgaaccgtgcgcagtacatgctgtgtaaaatgcta
gctgacaagcatcaccggatttgcgtagtaggtgacagcgatcagtcgatttaccgttgg
cgtggggcggatatcagcaacattttgaactttgaagaggactacccggaagcacgtacc
attttgctggagcaaaactatcggtcaacctcgaatattctgaatgccgccaatgaagtg
attgggcaaaatacgggccgcaagccgaagaagctatggactgacaaagaaggcggagcc
aagattaaagtttaccgggctgactcggagcatgatgagggctattttatcgcctcggaa
attcataaaaatatcaatgcaggcaaaacctatagccatcatgctattttgtaccgtacc
aatgctcagtcacgggttgtcgaggaaattttgatcaaatcggatattccgtaccagatc
gttggcggcatcaagttctatgatcgcaaagagattaaggacttgctggcgtaccttcgc
ctgctctccaaccctgatgatgatatcagcttgatccgaatcattaatgtgccaaaacgg
agtattggggatacaacggtcggaaaattgcaagcagccgcagcggagcgtggagtttct
attttccgcgtgttgcaggtggtagatgatttgggctttgccggacgtacgcgcaatgcg
cttgtcgagttttacgatatgatcgaaggtttgagtcggatggtagactatctgtcggtt
accgagttaacagaaaaaatgctggaaaccacccagtatcgactggagctgcaaaacgag
aatacgctcgaatcacgctcacgtctggagaatattgatgagtttctgtcggtaacgatg
gaatttgaaaaaggagcggaggacaaatcgctggtctccttcctgaccgaccttgctctt
attgcggatatagattccatgaatgacgatgaagaggaacaaagcgatgcagttgtattg
atgaccatgcatagcgcaaaaggactggagttcccaatcgtatttattgtcggtatggag
gagggggtattccctcacagtcgggcctttttggataatgaagagctggaggaagagcgc
aggttggcgtatgtcgggattacccgtgcagaagagcaactgttccttacatgcgcacaa
atgcgtactctgtttggtcgtaccactgctaatccgccgtcgcgctttctcgaagaaatt
ccggatgagttaaaagaggatacgatcatcaaaaaggatcgctaccgtcgttcaggaaat
gtaggaggctcttatggcgggcgtggactgggtaaaagcagtggcagtaactttggtgga
gagcgttcctttgatacaatgagtcgcagtggttcgtccgcttccgcgtcgccgcgcgta
accgtaacgacatcttcatctgcgaaaccaactccggctgcttcggcaggaggcccctcc
atttttgcggccggagacaaggtacagcatggtaaatggggaattggaaccattgtggct
gtcaaaggtacaggcaatgatatggagcttcagatcgctttcccggctccggtcggggtt
aaacgcctgctggctggctttgcacctattacaaaagtagaataa
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