Paenibacillus terrae: HPL003_04250
Help
Entry
HPL003_04250 CDS
T01668
Name
(GenBank) UvrABC system protein B (UvrB protein)
KO
K03702
excinuclease ABC subunit B
Organism
pta
Paenibacillus terrae
Pathway
pta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPL003_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_04250
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPL003_04250
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPL003_04250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_7
AAA_22
nSTAND_NTPase5
AAA_5
Kinesin
Arg_decarbox_C
HAD_Pex22
EAD4
Motif
Other DBs
NCBI-ProteinID:
AET57621
UniProt:
G7VUL4
LinkDB
All DBs
Position
complement(875425..877416)
Genome browser
AA seq
663 aa
AA seq
DB search
MSDIVVSDKTFEIQSEFQPQGDQPHAILELVEGITKGKKHQTLLGATGTGKTFTIAQTIA
KLNRPTLVIAHNKTLAAQLASEFKEFFPNNSVDYFVSYYDYYQPEAYIPSSDTYIEKDSS
VNEEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPKEYSSLLLSLRVGMEKPRNQILS
RLVDIQYQRNDINFVRGTFRVRGDVVEIFPASQGEHAIRVELFGDEIERITEIDVLTGEL
IGERDHVAIFPASHFVTHEDTMRVALVNIERELQERLAVLKEQGKLLEAQRLEQRTRYDI
EMMKEVGFCSGIENYSGPLTFRERGATPYTLMDYFPDDMLIVIDESHVTLPQIRAMYNGD
QARKNVLVEHGFRLPSALDNRPLKFEEFEDKVSQIVYVSATPGPYEMEKCETTVQQIIRP
TGLLDPIIEVRPSKGQIDDLISEIRLRMEREERVLVTTLTKKMSEDLTDYLKEVGIKVRY
MHSEIKTLERMAILRDLRLGTFDVLIGINLLREGLDLPEVSLVTILDADKEGFLRSERSL
IQTIGRAARNSDGRVIMYGDKITDSMDKAIKETERRRAIQIQYNEDHGITPQTIRKKIRD
VIEATKVAEARNDYLPGETGKLSKKERQSLIQRLEAEMKDAAKNLQFERAAELRDALLEL
RAD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatcgttgttagcgacaagacttttgaaattcagtcggaattccagcctcaa
ggcgatcagcctcatgccattcttgaactggtagaggggattaccaaaggaaaaaagcat
caaacgctgttgggtgctacgggtacgggcaagacatttaccatcgcgcagacgattgcc
aaattgaatcggcctactctggttattgcacataacaagactttggctgcccaactggcg
agtgagtttaaggagtttttccccaataattctgtcgattattttgtcagttactatgat
tactaccaaccggaagcgtacattccgtcttccgatacgtatattgagaaggattccagc
gttaatgaggaaattgataagcttcgtcactccgccacaagctctctgttcgagcgtcgt
gacgttattattgtagcgagtgtctcctgcatttacggtttgggttccccgaaagaatat
tcaagcctgctgctttcgcttagagtcggcatggagaaaccccgcaaccagattttgtcc
cgcttggtcgatattcaatatcagcggaacgatatcaacttcgtgcggggtactttccgt
gtgcggggagatgttgttgaaatattcccggcttcccaaggcgagcatgctatacgggta
gaactgttcggggatgagattgaacggatcaccgagattgatgtacttacgggtgaattg
atcggcgaacgcgatcatgtagccattttcccggcgtctcactttgttactcatgaggac
acgatgagggtagcactggtcaacattgaacgcgagcttcaagagcgattagcggtgttg
aaggaacaaggaaaactgctggaggcacaacgtttggaacaacgtactcgctatgatatc
gagatgatgaaagaagtcggtttttgttccggaatcgagaactactcgggtccgctgaca
ttccgcgagcgtggagcaacaccgtatacgctgatggattattttccggatgatatgtta
attgttattgatgagtctcatgttacgttgccgcaaattcgggcgatgtataatggtgac
caagcccgtaagaatgtgctggtggagcatggtttccgtctgccatccgcgctggataac
cgcccgctgaagtttgaggagttcgaagacaaggtgagtcagatcgtttatgtatcggct
actccgggtccctatgagatggagaaatgcgaaacgacggtgcagcagattatccgacct
acggggcttcttgatccgattatcgaggtgcggccgagcaaaggacagattgacgacctc
attagtgaaatacggcttcggatggagcgtgaggaacgggtactggtcaccacccttacc
aagaagatgtctgaagatctgaccgactatttaaaagaagtgggtattaaggtccgatat
atgcactccgagattaagacactggagcggatggcgattttacgggatctccgtttgggt
acctttgatgtgctgattgggatcaacctgttgcgagaaggtctggatttgccagaagta
tcgctggtgacaattttggatgcggacaaggaaggtttcttgcgttccgaacgttcgctc
atccaaaccattggacgggcagcacggaatagcgatggccgtgttattatgtacggtgac
aagattacggattccatggataaagcgataaaagaaaccgaacgccgccgtgcaattcaa
attcagtacaatgaagaccatggcattaccccgcaaacgattcgtaaaaagattcgtgat
gtcattgaagcgaccaaggtggcagaggcacgtaatgattaccttcctggtgagacgggt
aaactttccaagaaggagcgtcagtcgctgattcagcgtttggaagcggagatgaaggat
gccgccaagaatcttcaattcgagcgggctgccgagttgcgtgatgctttgttggagctg
cgggctgattaa
DBGET
integrated database retrieval system
