Paenibacillus terrae: HPL003_08535
Help
Entry
HPL003_08535 CDS
T01668
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pta
Paenibacillus terrae
Pathway
pta00040
Pentose and glucuronate interconversions
pta01100
Metabolic pathways
pta02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HPL003_08535
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPL003_08535
Enzymes [BR:
pta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HPL003_08535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
TonB_N
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
AET58470
UniProt:
G7VYE2
LinkDB
All DBs
Position
1835533..1837683
Genome browser
AA seq
716 aa
AA seq
DB search
MKKRITNVMSIVLLFSLVISLLGLQSTTTYAAGLSIIGGGGWNETAYVKWSPESNAEGYN
VYVKPVNASDSYYRQIDSELIRKYPSYWRADAVGLAAGDYVMKVEARLTDGSTVSAVSDN
LSVASHDRSGFAFSSDSLYGTGSGAYNEDGTLKNGAQVLYVTSKTAQTVTLDVKTNSSGR
VQTGVGLGEILALRQKGYDTTPLAIRFIGKVTEDDMKGQLNSSGYLEVKGKKNYSEMNMT
LEGIGDDAYAYGWGILLRYVGNVEVRNLGVMLFPDDGISMDTGNANVWVHNNDIFYGSAG
GDADQAKGDGSTDLKKGSTYITISYNHYWDSGKAALVGLSESSEFFATFHHNWFDHSDSR
HPRIRVASVHIYNNFFDGISKYGVGVTMGASAFVESNYFRHAKYPMLSSLQGTDALGEGI
FSGENGGVIKAYNNSIVDAASLIYANSNNGTAPANKNSFDAYLASSRNETVPSSYKALKG
GTAYNNFDTSVDTGVNGADIDNVSDVGQIVTAKAGRLNNGDFTWKFDNSIDDTSYVLNSA
LMAKIRSYTTQLVSVGGNSVPTEPTPTPIPEPTPGPVPEPTPEPAPTPIPEPTPEPTPTP
VPVPTPGEQVHNFTIAGTNSDFFDIKGNLSANKGTVEYSGLTLTQSLKIESSTSIGFTTT
EASTLTLVFNSADGTKIKVDGTSYSMTDGIVSVSLAPGAHTITKDTPANLYYMELE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaggattacaaatgtaatgagtattgttttattgttttctcttgtaatatct
ttattaggattgcaaagtactacaacttatgctgccggtctttcgatcatcggtggtgga
ggctggaatgaaactgcgtatgtaaaatggtcacctgaaagcaatgcggaggggtataat
gtatatgttaaacctgtaaacgcgtcagattcttactatcgacaaattgatagtgaactg
atccggaaatacccttcctattggagagctgatgctgtaggtcttgcagctggagattat
gtaatgaaagttgaagccaggctaacagacggttcaacggtcagtgctgtttcagataat
ctatccgtagcgtcacatgacagatctggatttgccttctcatcagactcgctatatggc
acgggctcgggtgcttataatgaagacggaacacttaagaatggtgcccaagttctgtat
gtaacatccaagactgcacaaacagtgaccctcgatgtgaaaaccaacagctcaggtcgt
gttcaaacgggtgttggtctgggcgagattttggcattaagacaaaaaggctatgataca
acaccgcttgcaatcagatttattggaaaagttacagaagatgacatgaaaggacaactt
aatagcagtggatatcttgaagtaaaaggcaaaaaaaattattcggaaatgaatatgacg
cttgaaggtatcggggacgatgcttatgcttacggatggggaatacttcttagatatgtc
ggaaatgtggaagtcagaaacctgggtgtgatgttgttccctgacgacggtatttcaatg
gatacaggaaacgccaatgtttgggtgcataataatgatatattctatggatctgcagga
ggagatgctgaccaagcaaagggcgatggttccacagaccttaaaaaaggatcgacctat
attacaatctcttataatcactactgggattcaggaaaagcggctctggtcggcttaagt
gaatcgtcagaattctttgccaccttccaccataactggtttgatcattcagactcccgt
catccacgtataagagtggcatctgtgcatatatataataacttctttgatggaatctca
aaatatggtgtcggtgttacaatgggagcttcagcctttgtagaatctaattattttaga
catgctaaatacccaatgctgagttccttgcaaggtacggatgctttaggggaaggtata
ttttcaggcgaaaacggaggtgtgattaaggcctacaacaatagtatagttgatgctgcc
agtctgatttatgccaactccaataacgggacagctccggccaataaaaactcctttgat
gcgtacttagcttcgtcgagaaatgaaaccgtaccaagctcatacaaagcattaaaagga
gggacagcttataacaactttgatacaagcgtcgatactggagtgaatggtgctgacatt
gataacgtaagcgatgttggacaaattgttactgcaaaagctggacgcctgaataacgga
gactttacatggaaatttgataattctattgatgacacgtcatatgtactcaattcagct
ctaatggctaaaataagaagctacacaactcaacttgtatctgtagggggaaattcagtc
ccaacggagcctacaccgactcctattccggaaccaaccccgggtccagttccagaacca
acaccagagccagcgccaacgcctattccggaaccgacaccagaaccaaccccgactcct
gttccggtaccaacacctggagaacaagttcataacttcaccatagctggaaccaatagc
gacttctttgatattaaagggaatctttcggcaaacaagggaactgtggagtatagtggt
ttgactctaactcaaagtttaaaaatcgagagctcaaccagtattggttttaccactacg
gaagcttcaacattaacattagtgtttaattcagcagacggaacaaaaatcaaggttgat
ggaaccagttattcaatgactgatggtattgtcagcgtatcacttgctcctggcgcacat
accattacaaaagatacccctgcaaatctttattacatggaattggaatag
DBGET
integrated database retrieval system
