Paenibacillus terrae: HPL003_08820
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Entry
HPL003_08820 CDS
T01668
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pta
Paenibacillus terrae
Pathway
pta00040
Pentose and glucuronate interconversions
pta01100
Metabolic pathways
pta02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HPL003_08820
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPL003_08820
Enzymes [BR:
pta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HPL003_08820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Glyco_hydro_59_C
3keto-disac_hyd
Laminin_G_3
Laminin_G_1
DUF6250
Laminin_G_2
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AET58527
UniProt:
G7VYJ9
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All DBs
Position
1899845..1901938
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AA seq
697 aa
AA seq
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MKSSLLKKCASVMLSSTMVLSLSLPLLGHAHADGNLQVSDDFEQGEAQGWTADSGNWSVV
ADGNGSTYQQSSRSESYSVKGNASWTNYSVQADVYVDDFNGSNRVYVAGRYTDSKNFYAA
SLYNKKGGALEIRKKVNGSMKTLATNNKYKLDTNTWYKVKLELSGSEIKMYVNDQLELTA
TDSSLASGAIGLVTSKAVAQFDNVIVSGASTETDTGTTPANPTPGTDKPTPGVDKNVTSN
NNFNLAGFSYGNPGGGEIKETDANYKKVYNAVDLNEALKKGTKVKVIEIMNDLDLGWNEL
PSAAKVMPFSANNPVLTNPVLKKTGVSKIYIENLSGITIFSANGAKIKHAGFVIKRSSNL
IFRNLEFDELWEWDEATKGNYDKNDWDYITVEGQSSKVWIDHCTFNKAYDGLVDVKKGSN
GVTISWSLFKGDDRSSNSWVTQQVNAMEADKSSYPMYAYLRSSAVGLSKEDIIDIAAGQK
KAHLIGATEMAADNADLEVTLHHNYYKDIQDRMPRLRAGNAHAYNIVMDDAGLARAKSRI
TSDMAKAIAAKGYHFDVVGNGAISTENGAVLLEKSYLIDVFSPVRNNQKDPKKDDYTGKI
KAEDVIFSDNGKVFRGGSDDANSPLAPYPAKAKDFSWNGFTKLPYSYTAENPENLVAQLQ
GKDGAGAGKLNWPSENWLKTVYKAVASKGTKTVEDSE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgagtttgttgaaaaaatgtgcaagtgtaatgttgagcagtacgatggttctg
tctttatcgttaccgttactaggtcatgcacatgcggatgggaatttacaggtaagtgat
gattttgaacaaggggaagctcaaggctggacagcagattcagggaactggtccgttgtc
gcggacgggaatggctctacataccagcaatctagtcgaagcgaaagctattctgttaaa
ggtaatgcatcttggacgaactatagcgtacaagcagatgtatatgtagatgattttaat
ggctccaatcgggtatatgttgcaggcagatacacagattccaagaacttctatgctgca
tctttatacaacaagaagggtggagcacttgaaattcgcaaaaaggtaaacggttctatg
aagacactggctaccaataacaaatacaaactggacaccaatacctggtacaaagtgaag
ctggagctgtccggttcggaaattaagatgtatgtcaatgatcaactggagctgaccgca
acagattccagccttgcttcgggagccattggtttggtaacctccaaggcggttgcccag
ttcgataatgttatcgtatccggcgcttcaactgaaacagatacaggtacaacacctgcg
aatccaacaccaggtacagataaaccaactcctggggtagataaaaacgtaacctccaat
aataactttaatttggctggcttctcctatggtaatccaggtggcggggaaattaaggaa
accgatgccaattacaaaaaagtttacaacgctgtagatctcaacgaagcacttaagaaa
ggtactaaagtgaaggttattgagattatgaacgatctcgacctcggctggaatgaactc
cctagtgctgccaaggtgatgccttttagtgccaacaaccctgtgctgacaaatcctgtt
ctgaagaaaacaggtgtgagcaaaatctatatagaaaacttgagtggaatcacgattttc
tcggcaaatggcgctaaaatcaaacatgccggctttgttatcaaaagaagctctaatttg
attttccgtaacctcgaatttgatgagctttgggagtgggatgaagcaaccaaagggaat
tatgacaaaaatgactgggattatatcacggttgaaggccaaagctccaaagtatggatt
gaccattgtacattcaacaaagcatatgatggcttggtagatgtgaaaaaaggcagtaac
ggagtcaccatttcctggtccttgttcaaaggagatgaccgcagctccaatagctgggtg
acccaacaggttaacgctatggaagcagacaaatcttcctaccctatgtacgcttatttg
agaagcagtgcagtaggcttgagtaaagaagatatcattgatatcgcagcaggacaaaag
aaagcgcatctgatcggtgctactgaaatggctgccgacaatgccgatttggaagttacg
ttgcaccataactactacaaggatattcaagaccgtatgcctcgtttgcgtgctggtaat
gcccatgcctataacatcgttatggacgatgccggattggctagagccaagagcagaatt
acttctgacatggctaaagcgattgctgccaaaggataccattttgacgtcgtgggtaat
ggtgcgatttcaactgagaatggcgcggtattgcttgaaaaatcatatttaattgatgta
ttttctccagttcgtaataatcaaaaagaccctaaaaaagatgactacactggcaaaatc
aaagcagaagatgttatcttctctgacaacggtaaagtatttagagggggcagcgacgat
gcaaacagcccgttagctccgtatcctgcgaaggccaaggatttctcctggaatggattc
acaaaattgccatacagctatacagccgaaaatcctgaaaacctggttgctcaattgcag
ggcaaagatggagcaggtgcaggcaagctgaactggccgagtgaaaactggcttaaaaca
gtatacaaggcagttgcttcaaagggtacaaaaacggtggaagattccgaataa
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