Paenibacillus terrae: HPL003_12010
Help
Entry
HPL003_12010 CDS
T01668
Name
(GenBank) RNA methyltransferase, trma family protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pta03009
]
HPL003_12010
Enzymes [BR:
pta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HPL003_12010
Ribosome biogenesis [BR:
pta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPL003_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
PrmA
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
RrnaAD
N6_N4_Mtase
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AET59159
UniProt:
G7W1X9
LinkDB
All DBs
Position
2588243..2589919
Genome browser
AA seq
558 aa
AA seq
DB search
MTSNRSGRGKSRRNEAAPNQGNPQKKTMPMNSERGQGQLRAGTGNGSASGSTQERERKAL
ENGRESRRPSSGGRSQDASNRNRVSAERTDLPVQKNDEAVMDIIGMNHDGEGVGRVEGFT
LFVPGALPGEKVRIKVLKTKKQYGYAKLLDIVQASPDRIAAPCAIYDQCGGCQIQHMSYE
AQLGWKRQHVVDVLERIGKLNVEGNEGSIAGEQAAVKVLPTLGMNEPWRYRNKAQVPIGV
TEGGLVGGFYARGSHRIVDMDTCLIQDERNDEVVARVKEIGRVLGISAYNEETGRGLLRH
VVVKTAFRTGEMMLVLVTNGRDIPHADAWIGSIREYIPHVASICQNVNTKRTNVIFGDET
RVLWGRDVIYDYIGNVQFAISARSFYQVNPVQTEVLYSKTVEYAGLTGKETVIDAYCGIG
TISLFLAQHADQVYGVEIVKEAIEDARSNALLNNMRNVKFEVGASEDVIPAWKEQGITAD
IIVVDPPRKGCDPRLLETILEMKPERVVYVSCNPSTLARDLRILENGGYSTVEVQPVDMF
PHTVHVECVVVIYRDKKH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtaaccgtagcggacgtggaaaaagccgccggaatgaagcagctcccaaccaa
ggaaatccacagaaaaagaccatgccgatgaacagtgaaagaggacagggacagcttcga
gctggaacaggaaatggaagtgcgagtggaagtacgcaggaaagggaacggaaagcattg
gaaaatggacgtgaatcacgccgtccttccagtggtggacggagtcaggatgcatccaat
cgtaatcgagtcagtgcagagcgtaccgatctgccagtgcaaaaaaacgatgaagccgtg
atggacatcatcggcatgaaccatgacggcgaaggcgtggggcgtgttgagggctttaca
ctgttcgttccaggcgcgttgccgggtgaaaaggtacggataaaggtgctgaaaacgaaa
aagcagtacggctatgccaaactgctggatatcgtgcaggcaagccccgaccggattgca
gcaccctgcgccatctacgatcagtgcggcggctgtcagattcagcatatgagctacgaa
gcacagctgggctggaaacgccagcatgtcgtggacgtgctggagcgtatcgggaagctg
aatgtggagggaaatgaaggttccatcgcaggtgaacaagctgccgtgaaggtacttcct
acgctgggcatgaacgagccgtggcggtaccgcaacaaagcccaagtgccgatcggtgtc
accgaaggcggacttgtcggcggcttctacgcacgtggcagccatcgtattgtggatatg
gacacctgcctcattcaggacgagcgtaacgacgaagtcgttgcacgtgtcaaagaaatt
gggcgggtgctgggcatcagcgcatataatgaagaaactggacgcggactgctgcgccat
gtcgtcgtaaagactgcttttcgtacaggcgaaatgatgctggtcctcgtcacgaatgga
cgagatatcccacatgcagatgcctggatcggtagtatccgtgaatatattccgcacgtg
gcaagcatttgccagaacgtgaataccaagcgaacgaacgttatttttggcgacgaaacc
cgtgtactatggggccgcgacgtgatctacgattacatcggaaacgtccaatttgctatt
tccgcgaggtccttctatcaggtgaaccccgttcaaaccgaagtgctgtatagcaaaacc
gtcgaatatgccggactcacaggtaaggaaacagtgatcgacgcgtactgcggcattggc
accatttccttgttcctcgctcagcatgcggatcaggtgtatggggtggagatcgtcaaa
gaagccatcgaggatgcacggagtaatgcgctgttgaacaatatgcgcaatgtgaagttt
gaggtaggtgcgtccgaagacgtcatccccgcctggaaagagcaaggcatcactgccgac
atcatcgtcgtcgacccgccccgcaagggctgcgatccacgcctgctcgaaactattctg
gagatgaagccagagcgcgtagtctatgtatcctgcaatccgagtacgctggcacgggat
ttaaggatactggagaatggcgggtatagtacagtggaagtgcaacccgtggatatgttt
ccgcatacggtgcacgtggagtgcgtggtagtaatatatcgagataagaagcattga
DBGET
integrated database retrieval system
