Paenibacillus terrae: HPL003_16285
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Entry
HPL003_16285 CDS
T01668
Name
(GenBank) DNA polymerase i
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pta
Paenibacillus terrae
Pathway
pta03030
DNA replication
pta03410
Base excision repair
pta03420
Nucleotide excision repair
pta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPL003_16285
03410 Base excision repair
HPL003_16285
03420 Nucleotide excision repair
HPL003_16285
03440 Homologous recombination
HPL003_16285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pta03032
]
HPL003_16285
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_16285
Enzymes [BR:
pta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPL003_16285
DNA replication proteins [BR:
pta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HPL003_16285
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HPL003_16285
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPL003_16285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
HTH_60
Motif
Other DBs
NCBI-ProteinID:
AET60003
UniProt:
G7W0R6
LinkDB
All DBs
Position
3491817..3494471
Genome browser
AA seq
884 aa
AA seq
DB search
MDKLMLIDGNSIIYRAFFAMPPLTNSSGQQTNAVYGFTTMLLRLLEEHKPTHILVAFDAG
KITFRHKGYEDYKGGREKTPPELSQQFPLLKELLTAFGIAQFELDGYEADDIIGTLSKTA
DEAGFNVLVVTGDKDMLQLASDNVTVGLTRKGVTEVETYGPEQIQERYGLKPLQIIDLKG
LMGDTSDNIPGIPGVGEKTALKLLHQYGSVEEVLAHTDELKGKMKERVETHADDARMSKD
LATIYRDVTLDKQLEDVVFDGLQAETGGPALAKLEFKSLLERLSFSGEVGSAGIGVEEAA
ADVTVLDEQRISELVNVLDTVDLLHVETHGDNPHHAEIVGLVFGAAGRQFFMTLAVLQTD
AAKPVREWLADAGCKKRGHDLHRTDLALHWHGIEFAGAEFDVQLAGYLLDPTDANQSLSG
LAAKYGLSSIRPDDEVFGKGAKYKVPDVDVLSDHVARKAAVIEALVPVQQAELEKTEMHK
LFHELEMPLSRILADMEKQGILVNVEELRALGKEFEAQIETLVREIYIIAGVEFNLNSPK
QLGEILFDKLGLPVIKKTKTGYSTDAEVLEKLAPYHDIVQNILQYRTIAKLQSTYVEGLL
KEISDKTGKLHTYFRQTVAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGWSILAA
DYSQIELRVLADISDDERLKEAFVHDMDIHTKTASDVFGIPAEDVDSNMRRSAKAVNFGI
VYGISDYGLSQNLNITRKEAARFIDQYFDVFQGVRRYMDDIVKDAKRDGYVKTLLERRRY
LPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQMDAALRDRNLRSRMLLQVHDEL
VFEVPPEEMETMKELVPATMEAALKLAVPLKAEVSYGSNWYEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggataaactcatgcttatagatggcaacagtatcatttaccgggcgtttttcgctatg
ccgccgttaacgaattcgagcggacagcagacgaacgcggtgtacggatttacaacgatg
ttgctgcggcttttggaggagcacaagccgacacatatactggttgcctttgatgccgga
aaaataacgttccgccataaaggatacgaggattacaagggtggacgggagaaaacgccg
ccggagctgtcccaacaattcccgctgctgaaagagctgttgaccgccttcggcattgcc
cagtttgagctggatggctatgaggcggacgatatcattggaaccctgtctaaaaccgcg
gacgaagctggttttaacgtgctggtggttaccggagataaggatatgcttcagttggct
tcagacaacgtcactgtcggcttgacccgcaaaggggttaccgaggtggagacgtacgga
cctgagcagattcaggagcgttatggcttgaagccgctgcaaatcatcgacctcaaaggt
ctgatgggcgatacgtcggataacattcccgggattccgggtgtgggggaaaaaacagcg
ctcaagctactgcatcagtatggatcggtcgaagaggtgctggcgcatacggatgagctg
aaaggaaaaatgaaagagcgcgtcgaaacgcatgcagatgatgcacggatgagcaaggat
ttggcgaccatctatcgggatgtaacgctggacaagcagttggaagatgttgtcttcgat
gggctgcaagcagaaacgggaggacctgctctggcgaagctggagtttaagtccttgctg
gagcggttatccttttcgggcgaggttggcagtgcaggaataggcgtagaggaagccgcg
gctgacgtgaccgttctggacgaacagcggattagcgagctggtaaatgtactggatact
gtcgatctgctacatgtggagacccatggcgataatccgcatcatgctgaaattgtgggg
ctggtatttggcgcagcgggacgacagttttttatgaccttggctgtattgcaaactgat
gcagccaagcctgtccgtgaatggctcgccgatgctgggtgcaaaaaacgggggcatgat
ctgcaccgtacggatttagctttgcattggcacgggatcgaatttgccggggccgagttc
gatgtgcagttggccggatatttgctggacccaacggatgcgaaccagtcactgagcgga
ttggcagccaagtatggcttgtcttcgattcgtccggacgatgaagtatttggcaaaggc
gctaaatataaagtgcctgatgtggatgtgctgtccgatcatgtggcgcgcaaggcagcg
gtgattgaagcgctggtgcctgtacagcaggctgagctggaaaaaacggaaatgcacaag
ctcttccatgagctggaaatgccgttgtcccgcattttggcggatatggagaagcagggc
attttggtgaatgtggaagaactgcgcgctttgggtaaagaatttgaagcccagattgaa
acgctggtgcgcgagatttacatcattgccggtgtggagttcaatctgaattcgcccaag
cagctaggtgaaattttgttcgataagctgggccttcctgttatcaaaaagacgaaaacc
gggtactccaccgatgccgaggtactggaaaagctcgccccataccatgatatcgtgcaa
aacattttgcagtatcgtactattgcgaaactccaatccacgtatgtagaaggattactt
aaggaaatttcggataaaacgggcaagttgcatacgtatttccggcagacagttgcagca
accggacgattgagcagtcaattcccaaatttgcaaaatattccgattcgtctggaagag
ggacgtaaaattcgtaaggtatttgtgccgtccgagccgggttggtccattctggcggcg
gactattcgcagatcgagctaagggtgctggctgatatttcggatgatgagcgattgaaa
gaagcctttgtccacgacatggacatccatacgaagacggcgtccgatgtgtttggcatc
cctgcggaagacgtagattctaacatgcggcgttctgccaaggcggttaacttcgggatt
gtctacgggatcagtgattacggtttgtcgcaaaacctgaacattacgcgcaaggaagcc
gctcgctttattgaccaatattttgatgtgttccagggcgttcgtcgttacatggatgat
attgtgaaggatgcgaagcgggacggatacgtaaaaacgctgctggaacgcagacgttat
ttgccggagattaacgccagcaacttcaacctgcgttcgttcgcggagcgtaccgcaatg
aatacgccgattcagggtaccgcagccgatattatcaagctggcgatggtccagatggat
gcggcgcttcgcgaccgtaatcttcgcagccgtatgctgcttcaagtacatgatgagctg
gttttcgaggttccgccggaggaaatggaaacgatgaaagagcttgtcccggctacgatg
gaagcggcgttgaagctggctgtaccgctcaaagcggaagttagctatggaagtaattgg
tatgaagcgaaataa
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