Paenibacillus terrae: HPL003_17105
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Entry
HPL003_17105 CDS
T01668
Name
(GenBank) RNA pseudouridine synthase (RNA-uridine isomerase)
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pta03009
]
HPL003_17105
Enzymes [BR:
pta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HPL003_17105
Ribosome biogenesis [BR:
pta03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HPL003_17105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosomal_S28e
Motif
Other DBs
NCBI-ProteinID:
AET60165
UniProt:
G7W4K8
LinkDB
All DBs
Position
3663427..3664209
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AA seq
260 aa
AA seq
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MSGKGGQTQRLDKVLTHMGYGSRSDIKRQVKQGMITVNGRTSKDSGLQVHPYNDQIEVNG
ERVVFREYIYIMLHKPPGVISATEDTRERTVLDLLGAEERHFEPFPVGRLDKDTEGLLLL
TNDGKLAHELLSPRRHVPKTYEATVSGHVTEEDIRQFAAGVELDDGYVTLPAQLNILRHE
KAQEADEKVISYISLVIHEGKFHQVKRMFEAVGKKVTYLKRTAMGPLRLDDQLPLGSYRE
LTNEELAWIGRDLASATSED
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaagggaggacaaacgcagcgtttggacaaggttctaacccatatgggttat
ggttcgcgcagtgatatcaagagacaggtaaaacaagggatgattaccgtgaacggtcga
accagcaaggatagcggcttgcaggttcatccgtacaacgatcagattgaagtgaacggg
gaacgggttgtctttcgggagtacatttatatcatgctgcataagccgccgggcgttata
tcggcaaccgaggatacaagagagcgaacagtactggatttgctgggtgcggaggaacgg
cattttgagcctttcccggtaggacggctcgataaggatacggaaggactgctattgtta
acgaacgatggtaagctggcgcatgaactcttgtctccacggcgacatgttcccaaaacg
tatgaggctacggtgtcgggacatgtcacggaagaggatatacgtcaatttgcagcaggg
gtggagctggatgacggctatgttacccttccggcccaattgaacattcttcgtcatgaa
aaagcacaagaggcagatgaaaaagtcatttcatacatttcacttgtgatccatgaagga
aagtttcatcaggtgaagcgcatgtttgaggcggttggcaaaaaggttacgtatttgaaa
agaacggcgatgggtccgttaaggctggatgatcagttacccttaggcagctatcgtgag
ctgacaaacgaggagctggcatggatcggccgggatttggcatctgcaacgtcagaggat
tga
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