Paenibacillus terrae: HPL003_17455
Help
Entry
HPL003_17455 CDS
T01668
Name
(GenBank) superfamily I DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pta
Paenibacillus terrae
Pathway
pta03420
Nucleotide excision repair
pta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPL003_17455
03430 Mismatch repair
HPL003_17455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_17455
Enzymes [BR:
pta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPL003_17455
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPL003_17455
MMR (mismatch excision repair)
Other MMR factors
HPL003_17455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_16
AAA_30
Viral_helicase1
SLFN-g3_helicase
PhoH
NACHT
DEAD
CSTF1_dimer
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AET60235
UniProt:
G7VZE1
LinkDB
All DBs
Position
3739104..3741482
Genome browser
AA seq
792 aa
AA seq
DB search
MPVATEQQWNEEQRRVEDVTAVISGRIRKLETEVGSVRGDVVDMRKDFWDEVTINFSEAD
DVGETSTSLRQQSEILSERERRHKHSTEALGRLKKLLESPYFARIDFAEEGQPAERVYLG
IASLLDNQDKEFLVYDWRAPISNLYYDNMPGPASYKTPAGEMEGELTLKRQFSIRDGQIR
FMFDTGVTIGDELLQAVLSRSSDAQMKSIVATIQREQNRIIRDDRSRMLIVQGAAGSGKT
SAALQRVAYLLYKYRDRLRADQVVLFSPNPMFNSYVSTVLPELGEENMLQATLQEYLERR
LGREFQLEDPFEQLEYVLSASSQTGYEARMEGIRFKSSKTFLQAITGYKAYLEQEGMRFK
PIRFQGREVVPVEEMVRRFYGFDSSVRLANRLELLRDWMLKELARFGKEECSAPWVDQQM
DLMEPEDYQRAYNRMRRKSKNKGHTFDDFTREREILARMVVSDRLKPLRKWIKALRFVDT
TRLYGELFLNETLLSQLANHAELPDSWSEISRQTLDRMQAGELAYEDVTPFLYLRELMLG
FRSNSNIRHVFIDEAQDYSPFQLAFFKRLFPQAKMTALGDFNQAIYAHASVLQDAEPLYE
LYGAEQTEMISLTRSYRSTQEIVEFTRGMVAGGEHIVPFNRKGEKPRVTEVRSRETLHRL
IVGNITELLAEGYESVAVICKNAGESAAAYEALEGELPVKPRLIKKTTPAFEKGVHIIPA
YLAKGVEFDAVLIYDGSAEQYQRESERKLFYTACTRAMHLLHIYTRGEITPFVSSQESDT
YARKVEESDPVL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggctactgagcagcaatggaacgaggaacaacggagagtagaggacgtgact
gctgtcattagcgggcgaattcggaagctggagacggaggttggctctgtacgcggagat
gtcgtagatatgcgtaaagacttttgggatgaggtaacgatcaactttagtgaagcggat
gatgtgggagagacatccaccagtttacgtcagcaatctgaaattctgtcggaacgggag
cgcaggcacaagcattctacagaggcgctaggtcgtttgaaaaagctgttggaatcaccg
tattttgcacgtattgattttgctgaggaagggcagcccgcagagcgtgtttatctgggg
attgcttccctgctggataatcaggacaaggaatttctggtctacgactggcgtgcgcct
atttccaatctctattacgataatatgccgggtcctgcttcctataagactccggcaggg
gaaatggaaggagaactgacgctcaagcgccaattctcgattcgagatggacagattcgt
tttatgttcgatacaggggtaacgattggagacgagctgctacaggcggtgctgagtcgc
agctcggatgctcagatgaaaagtatcgtggcaactatccaaagggagcagaatcgcatc
attcgtgatgatcgaagccggatgcttatcgtacagggggcggcgggtagcggtaaaacc
tctgctgcgcttcagagagtagcgtatttgctgtataagtaccgtgaccgcttacgcgcg
gatcaggtagtgctattttcgcccaatccgatgtttaacagctatgtttcaacggtactg
cctgaattgggtgaggaaaatatgctccaggcgactcttcaggagtatttggagcgtcgg
ttgggccgggagtttcaactggaagacccttttgagcagctggaatatgtattgtcggca
tcttcacagacggggtatgaggccagaatggaaggcatccgctttaagtcgtccaagacg
tttttgcaagcaattaccggatacaaggcgtatttggaacaggagggtatgcgttttaaa
ccgatccggtttcaagggcgcgaggtggttccagtggaggaaatggtgcgtaggttttat
gggtttgactcttcggtgcggctggccaatcgactggaactgcttcgggattggatgctc
aaggagctggcccgtttcggtaaagaggaatgctccgctccatgggtagatcagcagatg
gacctgatggagcctgaggattaccagcgtgcttataatcgtatgcggcgtaaatccaag
aataagggccatacctttgacgattttacacgtgaacgggaaatattggcgcgaatggtg
gtcagtgaccgcttgaagcctttgcgtaaatggatcaaagcgcttcgctttgtggacacg
acccgcttatatggcgagttgttcctgaatgagacgctgctgagccagctggccaatcac
gccgagctgcccgatagctggagtgaaatcagccgtcaaacgctggatcggatgcaggcc
ggggaactggcttatgaggacgtgacaccctttttgtatctgcgtgagctgatgttgggc
tttcgttccaatagcaatatccgtcatgtgtttattgatgaagcacaggactattcaccc
tttcagttggcttttttcaaacgtttgtttccacaggctaaaatgaccgcgctgggtgat
tttaatcaggcgatctatgcgcatgcttctgtgcttcaggatgcggagcctctctatgag
ctgtatggagcggaacagaccgagatgatttccctgacacgcagctaccgctcgacacag
gaaattgtggagtttacccggggaatggtggctggaggcgagcatattgtaccgtttaac
cgcaagggggagaagcctcgtgttacggaggtacgttcgcgtgaaacgctgcatcgtctg
atcgtcggaaacatcacggaattgctggcagaaggttatgaatccgtggcagtgatctgc
aaaaatgccggagaaagtgcggcagcctatgaagcgctcgaaggagagttgcctgtgaag
ccaaggctgatcaagaagacaaccccggcttttgaaaagggagtccatatcattccggct
tacctggcaaaaggcgtggaatttgatgcggtcctgatctatgacggctcagcggagcaa
tatcagcgtgaaagtgagcgcaagctgttctacaccgcatgtacgcgggctatgcatttg
ctacacatctatacaagaggcgaaattacaccgttcgtgagttcgcaggaatcggatacg
tatgcccgtaaagtggaagaaagtgatcctgttctgtaa
DBGET
integrated database retrieval system
