Paenibacillus terrae: HPL003_18100
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Entry
HPL003_18100 CDS
T01668
Name
(GenBank) DNA topoisomerase i
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pta03032
]
HPL003_18100
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_18100
Enzymes [BR:
pta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPL003_18100
DNA replication proteins [BR:
pta03032
]
Prokaryotic type
DNA Topoisomerases
HPL003_18100
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPL003_18100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
MACPF_b-prism
Toprim_3
Lar_restr_allev
Zn_ribbon_recom
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AET60362
UniProt:
G7W2L7
LinkDB
All DBs
Position
3856130..3858232
Genome browser
AA seq
700 aa
AA seq
DB search
MADSLVIVESPSKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFNPKYITIRGK
GSILKELKDARKKVKKVYLAADPDREGEAIAWHLAHALDLDDTADCRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIILDREN
EINEFVPEEYWTITAKLAIKDSTFEAKFHQLRGEKKELSSEADVQEVLEAIGKSSYKVRD
VKEKERLRNPSPPFTTSSLQQEAARKLNFRASKTMSVAQQLYEGVDLGKEGTVGLITYMR
TDSTRIAVSAQEEAKEFIIQKYGEAFVPESPRQYSKKAANAQDAHEAIRPTSALRDPETV
KPFMSRDQFRLYKLVWERFMASQMASAIMDTLSVDIEAGETIFRAAGSKVRFPGFMKVYV
EGNDDGKTEEDKLLPPLKSGDKLKKESVEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFFPTELGELVIEQMEEFFPEILNVEFTANMEGDLDHVEEG
EGDWVKVLSDFYESFEKRLEVAEEEMKEIEIKDEESDVICDKCGSPMVYKLGRFGKFLAC
SAFPDCRNTKPIVKDIGINCPTCGEGHVVERRSKKGRIFYGCDRYPECDFVSWDKPSIKP
CPSCGGLMVEKRTKQGTKLNCTVCDHSEMLEDSDEGVETS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcactcgtcatcgtggaatcgccttccaaggcgaagacgatcggcaaatac
ttgggcagcaaatatatcgtcaaggcttccatgggtcatatcagggatttgccaaagagt
cagatcggcgtagaggtcgaaaatgattttaatcccaaatacattaccattcgaggtaaa
ggctcgattttgaaagaattaaaggatgccagaaaaaaagtgaaaaaagtatatctggcg
gctgacccggatcgcgaaggcgaagctatcgcttggcatttggcgcatgcgctggatctg
gacgatacagcagactgccgcgttgtatttaatgagatcacaaagcaggccgtcaaggat
gcttttaaaacaccacgcaaaatcaatatggatttggtcaatgcccaacaagcacggcgg
atcctcgatcggcttgtcggctacaaaatcagtccattgctttggaaaaaggtaaagaag
ggcttatccgcagggcgcgtgcagtcggttgccgtgaaaattatcctggatcgagaaaac
gagattaatgagtttgtaccggaagagtattggacgatcacagctaaactagcgattaag
gacagtacctttgaggcgaaattccatcagcttcgtggcgaaaagaaagagctctccagc
gaagcggatgtacaagaagtgctggaggctatcggcaagtcgtcttacaaggtccgtgat
gtgaaagagaaagagcgcttgcgcaatccttctccaccattcacgactagctccttgcag
caagaggcggctcggaaactcaacttccgtgcatccaaaacaatgtccgtggcccagcag
ctgtatgagggtgtggacttgggcaaggaaggaaccgtgggtctgattacgtatatgcgt
acggattccacacgaatcgccgtctcggcccaagaggaagcgaaggaattcattattcag
aaatatggtgaagcttttgtacctgaaagccctcgtcaatattccaaaaaagctgccaac
gcccaggatgcgcatgaagcgattcgtccaacctccgcgctgcgtgatccagaaacggtt
aagccgtttatgagccgggaccagttccgtttgtacaaactggtatgggagcgttttatg
gccagccagatggcttccgctattatggataccttgtccgttgatattgaagcgggtgag
accatatttcgtgcagccggctcgaaggttcgttttccaggcttcatgaaagtgtatgtg
gaggggaatgacgacggcaaaaccgaagaggataagctgctgccgccccttaaatcgggt
gacaagctgaaaaaggaatcggttgagccgaagcagcatttcacgcaaccgcctccccgt
tatacagaagcacgactggtgaaaacgttggaagaactgggtatcggacgtccgagtacg
tatgcaccgacactagaaactattcagaagcgtggctatgtcgccattgaagagaagaag
ttctttcctacagagctgggagaactggtcattgagcagatggaggaattctttcctgaa
attctgaacgtggaattcacggccaatatggaaggtgatcttgaccacgtagaagaaggc
gaaggagactgggtcaaggtcttgagtgacttttacgagtcgtttgagaaacgtctggaa
gtggctgaggaagaaatgaaggaaattgagataaaggatgaagagtctgatgtcatttgt
gacaaatgcggcagcccgatggtgtataagctcggccgctttggtaaatttctagcttgc
tctgcgttcccggattgccgcaatacgaagccgattgtcaaggatatcgggatcaattgt
cctacatgtggtgagggccatgttgtggaaagacggagtaaaaaaggacgtatcttttat
gggtgtgaccgttatccggaatgcgattttgtatcctgggataaaccgtccattaagcct
tgtccaagctgcggtggcttaatggtcgaaaaacgtacaaaacagggaacgaagctcaac
tgtaccgtctgcgatcacagtgaaatgctggaagatagcgacgagggtgtagagacttca
taa
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