Paenibacillus terrae: HPL003_18280
Help
Entry
HPL003_18280 CDS
T01668
Name
(GenBank) RNA polymerase sigma-D factor (Sigma-28)
KO
K02405
RNA polymerase sigma factor FliA
Organism
pta
Paenibacillus terrae
Pathway
pta02020
Two-component system
pta02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPL003_18280
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPL003_18280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pta03021
]
HPL003_18280
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pta02035
]
HPL003_18280
Transcription machinery [BR:
pta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPL003_18280
Bacterial motility proteins [BR:
pta02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPL003_18280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
HTH_38
HTH_23
Sigma70_ECF
CtpB_N-like
7TMR-HDED
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
AET60398
UniProt:
G7W2Q3
LinkDB
All DBs
Position
3890010..3890798
Genome browser
AA seq
262 aa
AA seq
DB search
MNERKAAHLNHSELWEQWKEHGDKEAKKQLIEKYLHIVEYVSGRLAVGLPKNVSKDDLAS
NGVMGLIDALEKFDYERGLQFETYASWRVRGAILDGLRQGDWVPRSVREKAKKIEDAYQH
LEQRYLRTVSDEEMSHYLDVSEKEFQNMIQEVAVMSIVSLEDPIREEESETRLSLLVDEK
AKNPDHKVNEFTLRDALAQGIDKLTEKERIVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRATLDKQRDLLMRKD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcgaaaagccgctcatttaaaccattccgaactgtgggagcaatggaaagaa
cacggtgacaaggaagcaaaaaagcagctaattgaaaagtacctccatattgtggagtat
gtgtcgggacgccttgcagtaggtttgcctaaaaatgtatctaaagatgacctggccagt
aacggtgtcatgggcttaattgatgctcttgaaaagtttgactatgaacgtggtttgcag
tttgagacttatgcttcctggcgcgttcgaggggcgattctggatggtcttcgccaagga
gattgggttccacgttcggtcagggaaaaagcgaaaaagattgaggatgcctaccagcat
ctggagcagagatacttacgcacggtaagtgatgaagagatgagccattatttggacgtc
tccgaaaaagagtttcaaaatatgatccaggaggtcgctgttatgtcgatcgtttcactg
gaggacccgatccgcgaagaagaatcggagacacgactttcccttttagtggatgaaaag
gcgaaaaatccggatcacaaggtcaatgaatttacacttcgtgatgcccttgcacaaggc
attgacaaattgactgaaaaagaacgtatcgttgtttctttattgtattacgaagatttg
tcactcagtgaaattgctgaggtcatgtcgctttcaccttcgcgtatttcacaactgcat
tccaaagccatattacggctgagggcgacactggacaaacagcgggatctgctaatgcgt
aaagattaa
DBGET
integrated database retrieval system
