Paenibacillus terrae: HPL003_24065
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Entry
HPL003_24065 CDS
T01668
Name
(GenBank) exodeoxyribonuclease VII large subunit (exonuclease VII large subunit)
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pta
Paenibacillus terrae
Pathway
pta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPL003_24065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_24065
Enzymes [BR:
pta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPL003_24065
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPL003_24065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AET61531
UniProt:
G7VSP1
LinkDB
All DBs
Position
complement(5215133..5216497)
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AA seq
454 aa
AA seq
DB search
MAEQRIYSIKDLNRYIRMKLESDQVLSDVWIRGEISNFTHHSSGHMYFTLKDEGSRIRSI
MFATHNQRLPFVPKEGTRVIARGNVSVYERDGQYQFYATQMQPDGVGSLYLAYEQLKQKL
DIEGLFDSARKRNLPAHPTTIGVITSPTGAAVRDIITTLQRRYPQAGIVLYPVLVQGKGA
APAIVKAIEAMNRMQEVQVMIVGRGGGSLEELWAFNEEAVARAIFASGIPVISAVGHETD
FTIADFVADLRAATPTAAAELAVPHQQELRDQLLQREHRLRNALRQRLETSRERLTRLRR
SPVLLHPRRYMLQHAERMDMLHQRLIRAAGNRSRLNVEKNARMRQVLERFNPREQIRSAR
KQTDVAQRQLESAMRAITKTGRQQLHAGIRQLDALSPLKVMSRGYSLVYDEQEKRLIKSL
KDVQPGDSIKIKVSDGQLDCQVWGMKEDAKHGGE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaacagcgtatttactctattaaagacctgaatcgctatatccggatgaagctg
gagtcggatcaggtgctgtcggacgtatggatacgtggggaaatttctaactttacgcat
cattcgagtggtcatatgtactttacactcaaggatgagggcagccgcatccgttcgatt
atgtttgcgacccataatcagcggcttcccttcgtgccaaaggaaggtacgcgtgtaatt
gcccggggaaacgtatctgtgtatgaacgggatggacaatatcaattttatgcgacccag
atgcagcctgatggcgtgggaagtctctaccttgcatatgagcagctcaagcaaaagttg
gatattgaagggctgttcgacagcgcccgcaagcgcaatctgcctgctcacccgacgaca
attggtgtcattacttcgccaactggagctgccgtacgcgatattatcacgacgcttcaa
cggagatatccgcaggctggaattgtactatatcctgttcttgtgcagggaaaaggtgct
gcacctgctattgttaaggcgattgaagccatgaaccgtatgcaggaggttcaagtgatg
atcgtcggacggggcggtggctcgctggaggaattatgggcgtttaacgaggaagcggtt
gcgcgtgccatttttgcatcggggattccggtcatttcggccgtcggtcatgagacggat
tttacgattgcggattttgtggccgatttgcgtgcggctacgccgaccgcagccgccgag
ctggctgtgcctcatcagcaagagttgcgggatcagttactccagagggaacatcgatta
cgtaacgcactccgacagcggctggaaaccagccgtgaacggttgacccggcttcggcgc
tcaccggtgctgctgcacccgcgccgctatatgctacagcatgcggagcgaatggatatg
ttgcatcagcggctcattcgtgcagcaggcaaccgctcgcgcttgaacgtggagaagaac
gcgcgcatgcgtcaggtgctggagcggtttaacccgcgtgaacaaatccgttcggcccgc
aagcagacggatgtggcacagcgtcagctggaatctgcgatgcgtgctattaccaagacg
ggacggcagcaactgcacgcgggtattcgtcagttggatgcgcttagcccgctcaaggtc
atgtcgcgaggctacagcctggtgtacgatgagcaggagaaacggctgatcaagtcgcta
aaagacgtacagccgggagattccattaagattaaagtgagtgacgggcaattagactgc
caagtatggggaatgaaggaggacgcgaagcacggtggcgaatga
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