Paenibacillus terrae: HPL003_24460
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Entry
HPL003_24460 CDS
T01668
Name
(GenBank) primosomal protein n
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pta
Paenibacillus terrae
Pathway
pta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPL003_24460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_24460
Enzymes [BR:
pta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPL003_24460
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPL003_24460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Cas3-like_C_2
PIF1
Zn_ribbon_6
Flavi_DEAD
FeoC
ADDB_N
nSTAND_NTPase5
DAP3
TrwB_AAD_bind
T2SSE
Zn_ribbon_ISL3
AAA_19
SLFN-g3_helicase
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AET61608
UniProt:
G7VVB1
LinkDB
All DBs
Position
complement(5296633..5299254)
Genome browser
AA seq
873 aa
AA seq
DB search
MEMGNLVAKVIVDVPAKDTDRTFDYLIPESMRPWIEPGSRVAVPFGKRTVQAFVISVVPA
EEPPKYRMRAIQELLDLVPPLSPDLVELGKWISERYACNQIMALQVMIPTALKGKAERYI
SITEQHEFADHLPATDVLNYGSEADTHRTMRLDMRGEPEWALLTDDGMSDPAERQIVSFI
QEKEQVPLQQLSRRFPEEAEIIKSLLRRGVLQESQVIKDKLGKKTMKAVDLAIGIDEASA
ALEQFSIKAQRQREVLAFLLERSEFLPLPLKEVMTSLSVSAATVKALEDKGYAVLEDVEV
FRDPYRGRNFKPTKPLPLTEEQQYVYERIIRQLDTREQGAYLLHGVTGSGKTEIYLQTIQ
RCIEQKRQAIVLVPEISLTPQMVERFKGRFGDQVAVMHSRLSGGERYDEWRKIREGRVKV
AIGARSAVFAPFRELGLIIMDEEHETSYKQEETPKYHARDVAVRRAHQHGAVVILGSATP
SLESYYAARSQSNDEFAPLLLEMPTRALGNSLPEVHIMDMREELRAGNRSMFSRALHNGI
AERLERKEQTVLLLNRRGHSTFVMCRSCGYVAGCPHCDISLTYHQRSNNLRCHYCGYSES
VPQVCPECGSEHIRYFGTGTQRVEEELAKLFPGIRVVRMDVDTTTEKNAHEKLLKQFRDK
KADVLLGTQMVAKGLDFPDVTLVGVITADSALNLPDFRAAEKTFQLLTQVAGRAGRHQLP
GEVFVQTYTPEHYSVIHASRHDYGSFVREELKHRRNLHYPPYCRLILVTFSHEQLPVLVR
LAENYSATLQGRARQRGWFGNMDRLTSDVLDILGPVASPISRIKNRYRFQCMIKWRGNID
AIGLAQQVADEMAESAQAQKLLISLDVDPQMLM
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgggcaatttagttgccaaagttattgtagatgtgcccgctaaggatacggat
cgtactttcgattatctgatccctgagtcgatgcggccatggattgagccggggagccgg
gttgcagtgccgttcggcaaacggacggtgcaggcttttgtcatctcggtagtaccggcc
gaggagccgccgaaatatcggatgagagcgatacaggaactgttggatttggtaccgccc
ctttctccggatctggtagaactgggtaaatggataagcgaacgttatgcctgcaatcaa
attatggcgctgcaagtgatgattcctacagcgctaaagggcaaggctgaacgttatatt
tctatcactgagcagcatgagttcgcagatcatctgcctgctactgacgttttgaattac
ggttcagaagcggatacccatcgaaccatgcggctggatatgaggggagaacccgaatgg
gctctcctgactgacgatggtatgagtgacccggctgaacgccagattgtcagctttatt
caggagaaggagcaagtcccgcttcagcagctaagccgccgtttcccggaagaagcagag
attattaaatcgctgttgcgccggggggtgcttcaggagagtcaggttattaaggacaag
cttggtaagaagaccatgaaggccgtggatttggctatcggcatagacgaggcatcagcg
gcgctggaacagttttccatcaaagcgcagcgtcagcgggaggtacttgcttttttgctg
gaacgcagcgagttcctgcccctgccgctgaaggaagtcatgacctcgcttagtgtatca
gccgcaacggtcaaggcgctggaggataagggctatgcggtgcttgaggatgtagaggtg
ttccgcgacccttatcggggtagaaacttcaagcctacgaagccgttgccgctcaccgaa
gagcagcaatacgtgtatgaacggatcattcggcagttggatacgcgtgagcaaggagct
tatttgctgcatggagttacgggcagcggcaagacggaaatttatttacagacgattcaa
cgctgtattgagcagaagcgtcaggcgattgtgctggttccggaaatatcgttaacaccg
caaatggtagagcgttttaaaggtcgctttggtgatcaggtcgcggtgatgcacagcaga
ctgtccgggggcgaacgttacgacgagtggcgcaaaatacgcgaaggccgtgtgaaggtg
gcgattggcgcccgctcggctgtatttgcgccttttcgtgaactgggccttattattatg
gatgaggaacatgaaacctcttataagcaggaagagacacccaaataccacgcgcgtgac
gtggccgtacgcagagcccatcagcatggggctgtggttattcttggctcggctacgccg
tcgctggaaagctattatgcggcccgctcgcaaagcaatgacgagtttgcgccgctgctg
cttgaaatgccgacacgcgcactggggaactcattacccgaggtgcatatcatggatatg
cgcgaggaactgcgtgctggcaaccgttccatgttcagccgtgcattgcataacggaatc
gcagagcggctggagcgtaaggaacagacagtattgctgctgaatcggcgcggacattcc
acgttcgtcatgtgccgtagctgcggctatgtggcgggttgcccgcattgcgatatttcg
ctcacatatcatcagcggtcaaacaatttacgttgccattactgcggctattctgagtcc
gtgcctcaggtttgcccggaatgcggtagtgagcatattcgctactttggtacaggtact
cagcgagtggaagaggaactggcaaagttgtttcccggtatacgcgtcgtgcggatggat
gtcgatacaacgacggaaaaaaatgctcatgaaaagctgcttaagcaatttcgtgataaa
aaagcggatgtgctgctcggcacccaaatggttgccaaaggactggactttcccgatgta
acgctggtaggggtcatcacagcggattcggcgcttaatttaccggactttcgggctgcg
gaaaagacattccagttgctgacacaggtagccggacgcgccgggaggcatcaattgcct
ggggaagtgttcgtgcaaacctatacaccggagcattactcggttattcacgcgagtcgg
cacgattacggttcttttgtcagggaagagttaaaacaccgccgtaatctgcattatcca
ccgtattgccgtctcattttggtgaccttctctcatgagcagctcccggtactggttcgg
ctggctgagaactattcagccacactacaagggagagcgagacaaaggggttggttcggc
aatatggatcggcttacatcggatgtacttgacattttggggcccgtggcttcaccgatt
tcgagaatcaagaatagataccgatttcaatgtatgataaaatggcgtggaaatatagac
gcaattggtctggcccagcaggtagctgatgaaatggcggaatccgcacaggcccaaaag
ctgctgatcagtctggatgtcgatccgcaaatgcttatgtag
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