Paenibacillus terrae: HPL003_24840
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Entry
HPL003_24840 CDS
T01668
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pta
Paenibacillus terrae
Pathway
pta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPL003_24840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_24840
Enzymes [BR:
pta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPL003_24840
DNA repair and recombination proteins [BR:
pta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPL003_24840
Prokaryotic type
HPL003_24840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AET61684
UniProt:
G7VPG3
LinkDB
All DBs
Position
complement(5390395..5391063)
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AA seq
222 aa
AA seq
DB search
MFGNDWDEVLREEVEKPYFNELRYTLAREYKIHKVYPPKEDLFSALKLTPYHLTKAVILG
QDPYHGEGQAHGLSFSVRPDVRTPPSLQNIYKELRDDIGTPIPNQGYLVPWAEQGVLLLN
NVLTVREGQPQSHQGIGWERFTDAVIEAINEREQPAVFILWGSHAQKKASFVNTNKHLVL
KSSHPSPLAAHRGFFGSKPFSQTNAFLLEHGMEPIRWEIPNR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaatgattgggatgaagttttacgagaagaggtagaaaagccttatttcaat
gaattgaggtatacattagcacgcgaatacaagatacataaagtctaccctccaaaggaa
gatttgttttccgcactcaaattgacaccatatcatcttaccaaagcggttatattggga
caggacccctatcatggagagggacaagcccacggcttgagtttttccgtaagaccagat
gtgcgtacaccgccgtctctgcaaaatatatataaagagttgcgtgatgatatcggtact
cccattcccaatcagggctaccttgttccttgggcagagcagggagtgctgctgctgaac
aatgtgctgaccgtgcgtgaaggacaaccacaatctcatcagggaataggctgggaacgt
ttcacggatgccgttattgaggcgattaatgaacgtgagcagccggcagtgttcattttg
tggggaagccatgcccagaaaaaagcaagcttcgtgaatacgaacaagcatttggtgttg
aaatcaagccatcctagtcctttggcggctcataggggctttttcggcagcaagcctttt
tcgcaaaccaatgcatttttgctggagcatggaatggaaccgattcggtgggagatccct
aaccgctag
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