Paenibacillus terrae: HPL003_25535
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Entry
HPL003_25535 CDS
T01668
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pta
Paenibacillus terrae
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_25535
Enzymes [BR:
pta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPL003_25535
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HPL003_25535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_29
nSTAND1
AAA_25
ABC_tran
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AET61823
UniProt:
G7VQB3
LinkDB
All DBs
Position
complement(5543785..5547351)
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AA seq
1188 aa
AA seq
DB search
MSVRLLIGRSGSGKSTLIRREMTAMLRKEPLGKPMLLLVPEQSSFASEHALLTEAGNGIQ
GTVRAQVMGFHRLAYLVMQETGGSALVPVTEEGKKMLLYKIIRRRKDELSLFKDSGDQLG
FVDRLNTLFTELKQYGNDTRSVPEQLERMNAAGESTPILRGKLKDISLIYEDFERELTLK
YIDGEDTLRMLAEQIAESSIVRGADIWMDGYRRFTPHEYKVVEQLMLHASSLTVALTCNR
SYESGQLPHELDLFHPSAATYVKLKGMADELMMETQTQLLRPDPLPRFKDRPALAYLEAE
FERRAGYRNQERSMPQQQMRERWKDKQPAEIKLYAAANRRVELEGAVREMRRLARDEGAR
YREMALFVRHIEDYEPWVEPIFKQYEVPVFLDQRRSVLHHPLVEMIRASLDIVQRRWRYE
DVFRAVKTDLLLPQDGRVSREDMDRLENYALACGIQGSRWTDGRPWQAVPSLSLELEEQE
RNRQRDETLDLMELCRDVIVTPLRAFEKRLGKARTALEKCEAVYLLLEDAEIGHKLDNLI
HQAEEAGNPEQAKEHRQVWDAVLELLDQIVEMMGDEKLDTSLFAGVLETGLIEYRMGLVP
PALDQVLVGNTDRTRVAGIHHAFVLGMNEGVMPAVFHEDGVLNEQERTALNERGVELAPD
MTRRLLDERFLAYTALTSAGSSLWISYAVTDEEGKSLLPSELVRHVRQLFPALEEHPLAA
YPLPGDSWTTQWEYASHPSEALPQLIAQFRQWRHGGEILSPWWEVYNWYARQQGLEKDKL
RQLLTSLFYENHAEMRKETSRRLYGSKLRTSVSRMERFVACPFSHFASHGLRLKERQMYR
LKAPDIGQLFHAALGEMAINLRKRNVSWGSLSTEECRQEAESTVERLAPRLQGEILMSSK
RYGYILRKLKDIVSRASLILGEHARRDSFEPIGLELGFGSGQDLPSLTFRLDNGVVMEIV
GRIDRVDVAEGEKGLLLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLNAAEEWLGET
AYPAGTLYFHVHNPMLQSPNGLSAEQARQELLKRFKMKGLLLADRDVVGQMDTALDKGYS
SILPVAVKADGSFYSSASVASPEQWDSLLASVRDNIRTIGTRMTEGDVAIEPYRIQQETA
CTFCSFKPVCQFDDSLEGSGYNQWGKPGKDQIWDLLGSAQEGKGGMDL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccgtttgttaattggccgctcaggcagcgggaaaagtacgttaatccgtcgt
gaaatgacggctatgctacgcaaggaaccgctaggcaagcctatgctgttacttgtgccg
gagcaatcgtcatttgcttccgagcatgcgctgcttacagaagccggaaacggtattcag
gggacggtgcgcgcacaggtcatgggatttcatcgtcttgcctatttggtcatgcaggaa
actgggggttcggcgctggtacctgtgacggaggaaggcaagaagatgcttttatataaa
attattcgtcgtcgcaaggatgaactgagtttatttaaggattcgggagaccagttgggc
tttgtggatcggttaaatacgctgtttacagagctgaaacagtacgggaatgatactcgg
tctgtaccggagcaactggagcgaatgaatgctgcgggggaatccactccgattttacgc
ggcaagctcaaggacatcagtctgatttatgaggattttgaaagagagctgacgcttaaa
tatattgacggtgaggatacgctgcgtatgctggcggagcagattgctgagtcgtctatt
gtacgtggggcggatatttggatggatgggtaccgcaggtttacgccgcatgaatacaag
gtggtggagcagctcatgctgcatgcttcttcgttgacggtcgcgctgacctgcaatcgt
agctacgagagtggacagcttccgcatgagctggatttgtttcatccttcggcagctacc
tatgtaaagcttaaagggatggcggacgagctgatgatggagacacagacacaactgctg
cgccctgatccgcttccgagatttaaggaccgtccggcgttggcgtatctggaggcagag
tttgaacgacgtgcgggatatcggaaccaggaacgatccatgccgcagcaacagatgcgg
gagcgatggaaagataagcagccagcagaaatcaaactgtatgccgcagcgaaccgacgt
gtcgagctggagggcgcagtgcgcgaaatgcgccgcctggcccgagatgagggggcacgt
tatcgggaaatggctctgttcgtacgccatattgaggattatgagccgtgggtggagccg
atattcaaacaatatgaggttccggtgtttctggatcagcgcagaagcgtattgcatcat
ccattggtggaaatgattcgggcttcgctggatatcgttcagcggcgttggcggtacgag
gatgtatttcgtgcggtcaaaacggatctgctgttgccgcaggatggacgggtcagccgt
gaggatatggaccgtctggaaaattacgcattggcctgcgggatacagggcagccgctgg
acagacggacggccttggcaggctgtaccgagcctttcgctggagctggaggaacaggag
cggaaccgtcagcgggatgaaacgctggatctaatggagctgtgccgcgatgtgatcgtg
acgcctttacgtgcgtttgagaaacgtctgggtaaggcccggactgcacttgagaagtgt
gaagcggtgtacttgttgctggaggatgcagaaattgggcataagctggataacttaatc
catcaagccgaggaagcgggaaatcccgagcaggcgaaggagcatcgtcaggtatgggat
gcggtgcttgaactgttggatcagatcgtcgaaatgatgggtgatgagaagctggacact
tctttgtttgccggtgttctggaaacggggctgatagagtaccgtatgggtcttgttccg
ccagctctggatcaggtactggtaggaaatacagaccgtactcgtgtagctggtattcac
catgcctttgtcctgggtatgaacgaaggtgtgatgccagctgtatttcatgaggacggc
gtgctgaacgagcaggaacgtaccgccttgaatgaacggggagtggagctggcaccggat
atgacaaggcgtctgctggatgaacgttttctcgcgtatacggcgctcacgtcagccggg
agcagcctgtggataagctacgccgtgaccgacgaagagggcaagtcgttgctgccgtca
gagttggtacggcatgtccgtcaactgttccctgctttggaagagcatccgttagctgcc
tatcctttgcctggggactcgtggacgacgcaatgggagtatgcttcccatccgtccgag
gcattgccgcaactgatcgcgcaattccgacaatggcggcatggtggagagattttatct
ccctggtgggaggtatacaactggtatgcgcgccagcaggggcttgaaaaggacaagctg
cgtcagttgctgacttcacttttttacgaaaatcatgccgaaatgcggaaggaaacgagt
cgccgtctatacggcagtaagctacgtactagcgtatctcgtatggaacgttttgtcgct
tgtccgttttcgcattttgcttctcacggtcttcgcttgaaggagcgccaaatgtatcgg
ctgaaggcaccggatattgggcagttgttccatgcggcgctcggagagatggcgattaat
ttacgtaaacgaaacgtgagctggggcagtctcagtacagaggaatgccgacaagaggcg
gaatcgacggtggagcgtttggccccccgcctgcaaggcgagattttaatgagctccaag
cggtacgggtacattttgcgcaagctgaaagacattgtgagtcgggcttcgctgattttg
ggtgaacatgcgcgtagagacagctttgagccgattggactggaactggggtttgggtca
ggacaggaccttccctctttgacctttcggttggacaacggtgtggtgatggaaatcgtc
ggacgaattgaccgcgtagatgtggcagagggagaaaaagggttgcttttgcgtgtcatt
gattacaagtccagccaaaaggatctcaagctgcatgaggtgtactatggcttgtccttg
caaatgctcacgtacttggacgtgctgctgaatgcggcggaggaatggcttggcgagacg
gcttatccggcgggtacgctgtattttcacgtccacaatccgatgttgcagtcgccgaat
ggtcttagcgcggaacaggcccgtcaggagcttttgaaacgcttcaagatgaaagggcta
ttgctggcggatcgggatgtggttggacaaatggacacagcattggataaggggtattcc
tccattttgccagttgcggtaaaggcggatggcagcttttacagtagtgcgtctgtcgct
tctccagaacagtgggatagcctgctggcttcggtacgcgataatatccgaacgattggg
acacgcatgacagagggcgacgtggcgattgaaccttatcgtatccagcaagagacggca
tgtaccttttgttctttcaaacctgtttgtcaatttgacgacagtctggagggcagcggc
tacaaccaatgggggaaacccggcaaggatcagatatgggatttgctcgggtctgcacag
gaagggaaaggaggaatggacttatga
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