Paenibacillus terrae: HPL003_27060
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Entry
HPL003_27060 CDS
T01668
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pta
Paenibacillus terrae
Pathway
pta00040
Pentose and glucuronate interconversions
pta01100
Metabolic pathways
pta02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HPL003_27060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPL003_27060
Enzymes [BR:
pta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HPL003_27060
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Gp18_domIII_N
Motif
Other DBs
NCBI-ProteinID:
AET62124
UniProt:
G7VSB5
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Position
5871494..5872777
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AA seq
427 aa
AA seq
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MKKRFSLGIAVALLFTTLAPLGTPAHAAGDIGKEVLGSKNGWAAFSTGTTGGSAATASNI
FTVTNRKQLVDALGKSSNTTPKIIYVKGTINANVDDNNKPLGLNDYKDPKYDFDAYLKAY
DPSTWGKKVPSGTLEKAREASQKNQASRVVIDIPSNTTIVGLGSNAVINGANLQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDTITINGATHVWVDHNTFNDGSHPDSG
NGTFYGQEYQHHDGLLDVINQADLVTASYNHFYDHDKTSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPSLYIWGAGKSSKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTLLNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKAEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagattttcactcggcattgcagtagctctgctgttcactacccttgctcct
cttggcacacccgctcatgcggcaggcgatattggtaaagaggtgcttggtagcaagaac
ggatgggcagccttttctacaggcacaacaggcggatctgcagccacagcttccaatatt
ttcaccgtaaccaatcgcaaacaacttgtggatgccttaggtaaaagcagcaatacaact
cctaaaatcatttatgtcaaaggtacgatcaatgccaatgtcgatgacaataacaagccc
ttgggattaaacgattacaaggatcctaaatacgattttgacgcctacctcaaagcgtat
gacccatccacatggggtaaaaaggttccgtccggcacattggaaaaggcacgtgaggct
tcacaaaaaaatcaagccagtcgtgtcgtcattgatattccgtctaatacaacgattgtt
ggtttgggtagcaatgccgtcattaacggtgcaaacctccaactgaaaaaagggacagac
aacgtcattatccgtaatattgaattccaggatgcctacgattatttccctcagtgggac
ccaactgacggtagtacaggcaactggaattcggaatatgacaccattacaattaacggc
gccacacatgtatgggtagaccacaataccttcaatgatgggtctcaccccgatagcgga
aacggcaccttttacggccaagaataccagcatcatgatggacttctcgatgtgatcaat
caagccgatctggttactgcttcttacaatcacttttacgatcatgataaaacatcgatt
attggcaacagcgacagcaaaacagcagatgaaggggctttacgtgtaaccctgcatcac
aattattatgaaaacacggtacaacgcacaccacgcgtgcggtatggacaagtccatctg
tacaacaattactatacaggtgatgtaaaacgctccgaatatccttcgctgtatatatgg
ggcgcaggtaaatcttccaaaatcttcgccgaaaacaatgtcatcgacgttgcaggtttg
tccgcagctaaaatcgtaactgtctttggaggcaccgcgctgtccgacacaggcaccctc
ctgaatggacaagccgtaaatgcaggctccagcgcgggtctcagctcctctgtaggctgg
aaaccatcgctgaacgataagatttctccatccgccagcgtgaaggcagaagtcacttcc
caagccggttccggcaagctgtaa
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