Paenibacillus terrae: HPL003_27930
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Entry
HPL003_27930 CDS
T01668
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pta
Paenibacillus terrae
Pathway
pta03410
Base excision repair
pta03430
Mismatch repair
pta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPL003_27930
03430 Mismatch repair
HPL003_27930
03440 Homologous recombination
HPL003_27930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_27930
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HPL003_27930
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPL003_27930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HPL003_27930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AET62296
UniProt:
G7VTB6
LinkDB
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Position
complement(6065285..6067681)
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AA seq
798 aa
AA seq
DB search
MLHSQYRWKTPEVNLEAAQPLTEELGISPLLSRLLVNRGVTTAGEANRFLYGSVDDIHDP
FLLMGMKEAVPRIRQALERGEHILIYGDYDADGVSSTSLMIQLMRFLKASYDIYIPHRSN
EGYGLHNHALDWANQQGVTLVITVDTGISAVEQIAYAATLGIDVIVTDHHEPPAMLPEAY
ALINPKLPGCPYPFKGLAGVGVALKLAQALLGEVPEEWFEIAAIGTVADLMPLHGENRTM
VRRGIQSMRSSAFPGIRALLGIAGVDMSTVTSVNIAFALAPRINASGRLDHAGRAVSLLT
TEQEEEADQLAHALDLLNRERQQVVERIVEQAEQQLAAKLNGGTLPSVIVLAGEGWNVGV
VGIVASKLLDRYYRPTIILGIDAETGMCKGSARSIPALDIYSALTDSHDLMEHFGGHPSA
AGMTLSRDNLASFEERLNRYAASILTPDNLVPVAEADMVCRLDEVSLQVVEELELLQPFG
MGNPSPRFVLQGLQLREARKMGREKNHVKLLLEQNGLSLDAIAFRRGDLADFLQQQTELD
LLGELSINEWNGKRSLQLMMQDIRVQAPQIFDYRGVSDPFAELERGLKIFHPRIEERKND
VAVVMHPSSRLRPSRPVNADSIWVYDKEGGVTPGDDRRDTQHSVKSLFVLEPPDTPEQLQ
ALWSTFEDVENVFLLHSVSERGGRLVSPDRELFKRIYVVLSRMGAQPVDEKATLPALSRQ
CSCSVRMLSKVLDIFEELEFITRTEGRFCFVSNPPKRDLTSSPRYQELHDMAEMERYLLD
ADTTQMTSWIMSLMKGAS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
ttgcttcattcgcagtaccgatggaagaccccggaggttaacctggaagcggcccagccg
ttgacggaagagctggggatttcaccattgttgtcccggcttttagtgaatcggggtgtc
actacggccggggaagcaaaccgctttttgtacggaagtgtagacgacatacacgaccct
tttctgctcatgggcatgaaagaggcagtgccgaggatccgtcaggcgctagagcgtggc
gagcacatattaatttatggtgattatgatgcggacggggtatccagtacgtcattgatg
attcagcttatgcgcttcctgaaagcttcgtatgatatttatattccgcaccgctccaat
gagggatatggactgcataatcatgcccttgattgggctaaccagcagggggttacgctc
gtcattaccgtggacacgggaattagtgcagtagagcaaatcgcttatgcggcaaccttg
ggtatagatgttattgtaacagaccatcacgagcctcctgctatgcttcctgaagcgtat
gctctgatcaatccgaagctgcccggctgtccctatccattcaagggtcttgctggtgtc
ggtgtcgctctaaagctggcacaggcgctgctgggtgaagtacccgaggaatggtttgaa
attgctgctatcggtacggtagctgatctgatgccgttacatggtgagaaccggacgatg
gtacgtagagggattcagtccatgagaagctctgcgtttccgggtattcgggcgttgctt
ggtatagcgggtgtggatatgtctacagtgacctctgtcaacattgcatttgccttggct
ccccggattaatgccagcggacgtctggatcatgcaggacgggcggtctcccttttaacg
acagagcaggaggaagaagcggatcagctcgcgcatgcgctggatctgctcaatcgggag
cgtcagcaagtagttgaacgtattgtggagcaggccgagcagcagctggcagccaagctg
aatggaggcacgctgccgtctgtcatcgtattggctggtgaaggctggaacgtaggtgtc
gtggggattgtggcatccaagttgctggatcgctattatcgtccaaccattattctgggc
atagatgcagagacaggaatgtgcaaagggtctgcccgttctattccggccttggatatt
tacagtgctctgacagatagtcatgacctgatggagcactttggcggtcatccttcggct
gcgggtatgacgctgtctcgggacaatctggcatcgtttgaggagcggttaaatcgctat
gccgcttccattctgacgccagacaatctcgttcctgtagccgaggcagatatggtttgt
cgtttggacgaggtatctttacaggtggttgaagaactggagttactccagccctttggt
atggggaacccgtctccacgtttcgtgttacagggtcttcaattgcgtgaggctcgtaaa
atggggcgtgagaaaaatcatgtaaagctgttgctggagcagaacggattatcgctggat
gcgattgccttccggcgtggtgatctggctgattttttgcagcagcaaaccgagcttgat
ctgctgggcgagctgtctattaatgaatggaacggtaaacgctccctccaactaatgatg
caggatatccgtgtacaggctccgcaaatttttgattatcggggagtatcggaccctttt
gctgagctggagcgggggctaaagatctttcatcctcgtatagaagaacgaaaaaatgac
gttgctgttgtgatgcatccatcgtccaggcttcgtccttctcgtccagtgaacgccgat
tccatatgggtatatgataaggagggcggcgttactcccggcgatgatcgaagggataca
caacactctgtaaagtcattgttcgtgttggagccaccggatacaccggagcagttgcag
gcattgtggtctacatttgaagatgtagagaatgtgtttctccttcattcggtcagtgaa
cgaggcggtcggctcgtcagcccggacagagagctgttcaagcgtatttacgttgtgctt
tcccgaatgggggcacagcctgtggatgaaaaagcgacgctgcccgctcttagtcgtcaa
tgctcctgttcagtacggatgctgtctaaagtgctggacattttcgaggagcttgagttt
ataacgcgtacagaagggcgcttctgttttgtgtccaatccacccaagcgggatttaacg
tcttctccacgttatcaggaattgcatgatatggctgaaatggagcgttatctgctggat
gcggatacaacccagatgacaagctggattatgtcgcttatgaagggcgcgtcttga
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