Primulina tabacum: 142504540
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Entry
142504540 CDS
T11246
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ptab Primulina tabacum
Pathway
ptab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142504540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptab03041
]
142504540
Spliceosome [BR:
ptab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
142504540
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
142504540
NCBI-ProteinID:
XP_075473498
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Position
9:6096485..6100581
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AA seq
483 aa
AA seq
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MATLNDSFLADLDELSDNEDDLLEEEDADAEHMEEDVDGDLADIESLNYDDLDSVSKLQK
TQRYTDIMQKVENALEKGSESSNLGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPVDYARVVQKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIAACDRALGLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRMRACRLLAAK
STLAARVDSTRGDPTGKTGRTFRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSIGQSKLAA
KVAKKFKEKRFGSSGATSGLTSSLAFTPVQGIELSNPQASLLGGGIQSTYFSETGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccttaatgactctttcctggccgatcttgacgaattatctgataacgaagat
gatcttctggaggaggaggatgctgatgcagagcatatggaagaagatgtagacggggac
ttggcagatattgaatcacttaattatgatgatctcgatagcgtatccaagcttcaaaaa
actcaacgttacactgatatcatgcagaaagttgaaaatgcacttgagaaggggtctgag
agctcaaatcttggaattgtattagaagatgatccagaatatcagttgattgttgattgc
aatgccttgtccgttgatattgaaaatgaaattgtgataattcacaattttatccgtgac
aagtatcgcctaaaatttccggagcttgagtcactagttcatcatccagtcgactatgct
cgagttgttcaaaaaattgggaacgaaatggacctgactcttgtggatctagaaggtctt
ctaccctctgccattatcatggtcgtttcagttaccgcatcaaccaccagtggaaagcct
ctcccggaagatgtcttgcaaaagacaatcgccgcatgtgaccgagctcttggtctagat
tcagcaaagaaaaaggttcttgattttgttgagagtcgaatgggttatatcgctccaaat
ctttctgctatagttggaagtgctgttgctgcaaaacttatgggaacagctggtggtctc
tcagcattagcaaagatgccagcttgtaatgttcagcttctcggtgcgaaacggaagaac
ttagcaggattttcaacggcgacgtcccaatttcgtgttggttacttggaacaaactgaa
atatttcagagcactcctccttccttgaggatgcgtgcctgccgacttttggctgcaaaa
tctacacttgctgcacgtgtcgattctactagaggagatccaacaggaaaaactgggaga
actttccgtgcagagattcataaaaaaattgagaagtggcaagagcctcctcctgccaag
cagcctaagcctcttccagttcctgattctgagcctaaaaagaagagaggcggacgaagg
ttgaggaagatgaaagaaagatacgctattaccgacatgcgtaagcttgcaaataggatg
cagttcggtgtaccagaggagagctctttaggtgatggactcggggaaggatatggaatg
cttggtcaggctggaaatggcaagctacgtgtatcaattggtcaaagcaagcttgctgct
aaagtagcaaaaaagtttaaggagaagcgttttggaagcagtggtgcaacttctgggcta
acttcaagtttggctttcacacccgtgcagggaattgaactctcaaatcctcaggcaagc
ctgcttggtggtggaattcagagtacgtacttttcagaaactggaactttttcaaagatc
aagcggacttga
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