Primulina tabacum: 142504794
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Entry
142504794 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Pathway
ptab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142504794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142504794
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142504794
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
142504794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
142504794
NCBI-ProteinID:
XP_075473716
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All DBs
Position
10:complement(5145090..5148161)
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AA seq
300 aa
AA seq
DB search
MAPRTGSCTDATESHSKYGNYRMLMKEDIVHNRKNAIVLREKHGLKGVQELLQCRACPNS
THPPIQQCPNGHILCVNCKRLHNCCPTCQIELGNLRCLALEKVTPSLELPCRYQSSGCNN
IFLYHGKIKHEKNCPFRPYSCPHVSSECHVTGDIPFLVAHMKEDHAVDMHDGCTFIHRYV
KSNPCEVENAIWMLTVFNCFGRHFCLHFEAFLLGTVPVYMAFIRFMGEDCMAKKFSYTLE
VKACGRKLVWQGVPRSIRDSHSKVRDSQDGLIIPRSLALCFSGGDGERLKLRITGRIWKV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctccaagaactggttcttgcactgatgcaactgaatcacactcgaaatatggtaat
tatagaatgctgatgaaggaagatattgttcataatcggaaaaatgcaattgttctccgt
gaaaagcatggtttaaagggtgttcaagaacttcttcagtgccgggcctgtccaaattca
acgcatccacccattcaacagtgtccaaatggtcatatattatgtgtaaactgcaaaaga
cttcataactgctgcccaacttgccaaattgagcttggaaacctaaggtgtttagctttg
gaaaaagtgactccatcgttggagcttccctgcagataccaaagttcgggctgtaacaat
atatttctgtaccacggcaagattaaacacgaaaagaattgcccttttcggccttactct
tgtccacatgtcagttctgagtgtcatgtaaccggtgatattccatttcttgttgctcat
atgaaagaggatcatgcagttgatatgcacgatggatgcactttcattcatcgatacgtt
aaatcaaatccatgcgaagtcgaaaatgctatatggatgttaactgtgttcaactgtttc
ggaagacatttctgtttgcactttgaggctttcttactcggaacagtacctgtctacatg
gccttcattcgttttatgggcgaagactgcatggccaaaaagttcagctacacattagaa
gtcaaagcctgtggccgtaagttggtatggcaaggtgttccaaggagcatacgcgacagt
cacagtaaagttcgtgatagtcaagatggactcattatcccgaggagcttggctctctgt
ttctctggtggggacggtgaacgacttaaattgagaataactggacggatatggaaggtg
taa
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