Primulina tabacum: 142505063
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Entry
142505063 CDS
T11246
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
KO
K07466
replication factor A1
Organism
ptab Primulina tabacum
Pathway
ptab03030
DNA replication
ptab03420
Nucleotide excision repair
ptab03430
Mismatch repair
ptab03440
Homologous recombination
ptab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142505063
03420 Nucleotide excision repair
142505063
03430 Mismatch repair
142505063
03440 Homologous recombination
142505063
03460 Fanconi anemia pathway
142505063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptab03000
]
142505063
03032 DNA replication proteins [BR:
ptab03032
]
142505063
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142505063
Transcription factors [BR:
ptab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142505063
DNA replication proteins [BR:
ptab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
142505063
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
142505063
MMR (mismatch excision repair)
142505063
DSBR (double strand breaks repair)
HR (homologous recombination)
142505063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Htt_bridge
TMEM219
zf-like
Motif
Other DBs
NCBI-GeneID:
142505063
NCBI-ProteinID:
XP_075473997
LinkDB
All DBs
Position
10:complement(8373140..8376092)
Genome browser
AA seq
644 aa
AA seq
DB search
MPVNLTANAISAINAGDVNSKPLVQVLDIKLIGSTQERYRLLLSDSVATQHAMLATQLND
RVKSALVRSGSVVQLIDYICSTVQNRKIIVILNMETIITDCEIIGNPKMFSESDSVPQNS
APPPLANNNIGVHSSARTNFSNGKPSSFQNSGSGVQSYPPTIQPPYQPPPNYKNHGAIMR
NEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDSDGGEIRVT
CFNAVVDRFYDAIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLEATSSVDLCTDEDASI
PKQQFSFRPIGEIENAENNSILDVIGVVVTVNPSVPILRKNGMETQRRILNLKDQSGRSV
ELTLWGDFCNREGQQLQEMVETGLSPVLAVKAGKVNDFSGKSIGTISATQLFVNPDFPEA
RRLRDWFDHGGKDTASHSISREIMPGGSKNEIRKTITQIKDEGLGRSDKPDWITVKATIS
FIKTDTFCYTACPIMIGDRQCNKKVTKSGNSLWLCDRCNQEFEDCDYRYLLQVQVQDHTG
LTWVTAFQEAGEEILGCPAKELYMVKYETEDELKFLEIIRNCLFTEFRLKLKIKEEIYGD
EQKLKITVVKAEKVNYSEESRFLFDMISKFHRTERYNKISDRRC
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacggcgaatgccatatcggcgatcaatgccggcgatgtgaactcg
aagccgctggtgcaggtgttggatatcaagctgatcggttctactcaggagcgctaccgc
ctcctcctctctgattcagtcgcgactcagcacgcgatgctcgctactcagctcaacgac
cgtgtcaagtctgccttagtacgcagtggatccgttgtccagctcatcgattatatctgc
agcaccgtgcaaaatcgcaagattattgtgattttaaacatggaaactatcataactgac
tgcgagataatcggcaacccaaaaatgttttctgaatctgattcagtgcctcaaaattca
gcacctccaccattggcaaacaataatatcggtgttcatagttcagcgcgcactaacttc
agtaatggaaaaccttctagctttcaaaattcgggcagcggtgtccagagttatcctccc
accattcaaccaccatatcaaccacctccaaactataaaaatcatggggctatcatgaga
aatgaggccccagcacgcatcatccctatcgccgctttgaatccttatcaaggccgatgg
gctatcaaagcacgggtgacagcaaaaggagatctgcgacgttacaacaatgccaaagga
gatggtaaggtgttctcatttgatcttcttgattctgatggaggggaaattcgggttaca
tgcttcaatgctgtagttgatcgtttctatgacgcaattgaagttggaaaagtatatgtg
atatcaaaaggtagcttgaaaccggcccagaagaacttcaaccatctgaagaatgagtgg
gagatattcttggaagcaacatcatcagtggatctctgtacagatgaagatgcatccata
ccaaagcaacagttctcttttaggccaattggtgaaattgaaaatgcagaaaataactct
atattagatgtcattggtgttgttgtaactgtcaacccgtctgtccctatcttgagaaag
aatggtatggaaactcaaagaagaattctgaacttgaaggaccagtctgggagaagtgtt
gagttgacattatggggagatttctgcaacagggaaggacagcaactgcaagaaatggtt
gaaactggattatcccccgttttggctgtcaaagctggaaaagttaacgactttagtggt
aagtccattggcaccatatctgctacacagttatttgtgaatcctgattttccagaagct
cgtcgcttaagagattggtttgatcatggaggtaaagatacagcttctcattctatatct
agggaaattatgcctggaggatcaaaaaatgagatacgcaagaccattacgcagataaag
gatgaagggctcggaagatcggacaagcctgactggatcactgttaaggcaaccatatct
ttcatcaaaaccgatactttttgttatacggcctgcccaataatgattggggatagacag
tgtaacaagaaggtgactaaatcagggaactcactgtggctgtgtgataggtgtaaccaa
gaatttgaagactgcgattacagataccttcttcaagttcaagttcaggatcatactggc
ttgacatgggtgacggcttttcaagaagctggtgaagagattttgggttgcccggcgaag
gaattatatatggtgaagtatgaaaccgaagatgaactgaaatttcttgaaattattcga
aactgcctatttacagagtttcggcttaagctaaagattaaagaggagatatatggtgat
gaacagaagttgaagatcacagttgtcaaggcagagaaggtgaactattcagaagagagt
agattcttgttcgatatgatttcaaaatttcatcgcaccgaaagatacaataaaataagt
gataggagatgttaa
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integrated database retrieval system
