Primulina tabacum: 142505205
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Entry
142505205 CDS
T11246
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
ptab Primulina tabacum
Pathway
ptab03082
ATP-dependent chromatin remodeling
ptab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142505205
03083 Polycomb repressive complex
142505205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptab03036
]
142505205
Chromosome and associated proteins [BR:
ptab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
142505205
Histone modification proteins
HAT complexes
HATB complex
142505205
HDAC complexes
Sin3A-HDAC complex
142505205
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
142505205
PRC2.2
142505205
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
142505205
Heterochromatin formation proteins
Other heterochromatin formation proteins
142505205
Chromatin remodeling factors
NuRD complex
142505205
NuRF complex
142505205
NuRF complex (fruit fly)
142505205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
142505205
NCBI-ProteinID:
XP_075474199
LinkDB
All DBs
Position
10:complement(7924139..7931595)
Genome browser
AA seq
494 aa
AA seq
DB search
MEATPTTEPKKRGRPKGSTKSKGDKEKDSGGGGGAVQPRMRGSGGEKRNAAAEESYAHWK
LLVPVLYDWLAHHNLVWPSLSCRWGPVLEQGNYKTKQRLYLSEQTDHTQPNTLIIANCEV
VKPRVASENHIANFNEDARSPYVKKYKTILHPGEVNRIRELPQNKNIVATHTDCPEVLIW
DVESQPNRHAVLGAAESRPDLVLSGHQDNAEFALAMCPAEPFVLSGGKDKTVVLWSIQDH
VSSLATDLTQSAESTSSIVKAADNSPVGPRGIFQGHTDTVEDVQFCPSSSQQFCSVGDDS
CLILWDARIGNSPVVKVEKAHNADLHCVDWNSQDENYILTGSADHTVCMFDRRRLTSDGV
GSPVHKFEGHTAAVLCVQWSPDKHSVFGSSADDGLLNIWDYEKVGNQEEAASKSPNTPSG
LFFQHAGHRDKVVDFHWNANDPWTIVSVSDDGEFSGGGGTLQLWRMIDLLYRPKDEVLEE
LQQFKDHVIECAKT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaggctacgccgactactgagccgaagaagcgtgggaggcccaagggttccaccaaa
tccaaaggagacaaggagaaagactcaggcggtggaggaggggcggtgcagccgagaatg
agaggctcgggcggtgaaaagagaaatgccgccgcggaagagagctacgcgcactggaag
ctgctggtgccggtgctgtacgactggctcgcgcatcataacctagtttggccgtctctc
tcttgccgttggggtccagttcttgagcaaggaaactacaagaccaaacagcgtctttat
ctatctgaacaaacagatcacacacaaccaaacactttgattatagcaaattgtgaggtt
gtcaagccccgagttgcttcagaaaatcacattgctaatttcaatgaagatgcgcgttcg
ccgtatgtcaagaagtacaaaactatcttacatccaggagaggtgaacagaatcagagaa
ctgcctcagaataaaaatatagtagcaacacacactgattgccctgaagttcttatttgg
gatgttgaatcccaacctaatcgacatgctgtccttggagctgctgaatctcgtccggat
ttggtattgtctggacaccaagataatgcagaatttgctcttgcaatgtgcccagctgaa
cctttcgtactttctggagggaaggataaaactgtggtattgtggagtattcaggatcat
gtttcatctctggccacagatttaacccagtcggctgaatctaccagttcaattgtgaaa
gctgctgataattctcccgttggtccacgtggaatttttcaggggcacactgatacagtt
gaggacgttcaattttgcccatcaagttcgcagcagttttgtagtgttggagatgattcc
tgcttgatactgtgggacgcgaggattggtaacagtccagttgtcaaggttgaaaaggca
cataatgctgatcttcattgtgtagattggaattctcaggatgaaaattatatattaact
gggtccgcggatcacacagtttgcatgtttgatcgccgtcgtttaacctctgatggagtt
ggatcgcctgtccataaatttgaaggtcacactgctgctgttctttgtgtccagtggtca
cctgacaagcactcagtctttgggagttcagcggacgatggattgttgaacatttgggac
tatgagaaggttggtaaccaggaagaagctgcgtccaaatctcctaataccccatcaggg
ctgtttttccaacatgctggacacagggacaaggttgttgacttccactggaacgccaat
gatccatggacaattgttagtgtatcggatgatggggaattctctggtggtggtggtacc
ttgcagctgtggcgaatgatagatttattataccggcccaaggacgaagttctggaagag
cttcaacagttcaaggaccatgtcattgagtgcgccaagacttga
DBGET
integrated database retrieval system
