KEGG   Primulina tabacum: 142505419
Entry
142505419         CDS       T11246                                 
Name
(RefSeq) uncharacterized protein LOC142505419 isoform X1
  KO
K03873  elongin-B
Organism
ptab  Primulina tabacum
Pathway
ptab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142505419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptab04121]
    142505419
   03400 DNA repair and recombination proteins [BR:ptab03400]
    142505419
Ubiquitin system [BR:ptab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     142505419
   Cul5 complex
     142505419
DNA repair and recombination proteins [BR:ptab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     142505419
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UBL_UBAC1 Ubiquitin_2 Dsc3_N UCH_UBL1 Chal_sti_synt_N GABP-alpha
Other DBs
NCBI-GeneID: 142505419
NCBI-ProteinID: XP_075474511
LinkDB
Position
10:5376734..5380392
AA seq 104 aa
MAMYIRVKREKTTYFLQCVPSETILQIKEKLQELIDQPAKNQKLILMSNREVLDDSKSLA
DQKVENDAVVGLTLRKDDNEFEEVNIARSNDFYQSHDSEGSSNW
NT seq 315 nt   +upstreamnt  +downstreamnt
atggcgatgtatatccgtgttaaacgtgagaagacaacttactttctgcaatgcgttcca
agtgagactattctacaaatcaaggagaagttgcaagaactcattgatcagccagctaaa
aatcaaaaactgatactaatgtcaaatcgggaagtgttggacgattctaaatccttggca
gatcaaaaggttgaaaatgatgctgtcgtcggcctgaccctgagaaaagatgataatgag
ttcgaggaagtaaatatcgcgaggtcaaatgatttctaccagtcgcatgactcggaaggt
agttctaattggtga

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