Primulina tabacum: 142505429
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Entry
142505429 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142505429
KO
K13114
pinin
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142505429
03015 mRNA surveillance pathway
142505429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142505429
03041 Spliceosome [BR:
ptab03041
]
142505429
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142505429
Spliceosome [BR:
ptab03041
]
Complex C
Other components
EJC/TREX
142505429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
142505429
NCBI-ProteinID:
XP_075474528
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All DBs
Position
10:complement(4235338..4238609)
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AA seq
420 aa
AA seq
DB search
MGSAVVVEKTEEELRREIDELHRQQREISERLRDPRGIRRGGLSNSGPRNFTAKQRGFVR
PAERNEMEDQPAAKKRLSSAVVKLEDGEIADDGSEAAKDVKREDLPVEIENTNASQSGKK
PSFWPQQDGNKRPLPSKMDFEIAPAEHVPRVLPKDEDPSLVSRNKRMLGQLLGTLERFRK
EDKQLSGTEAYMRRSDSLKRAEQRAREESEKLRQQEREQIAEKRKRDLTLRARIAAKAEE
KKLELLFLRWSEHHKKLGNFIRTKTEPPIYYMFAKPLEDRDEALLEQEKEQSFQEWKSSR
RSELSQYQKEIAEKYIANVENGLERWQNGRKAWIANNDATNLQETMDKELETHQLEHGPK
TRKIPGQSNNEDEDDVEDINVAEDYMMEDVLGVDENVRRVDEVAKAETNNDIVVEENKEE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgcggttgtagttgaaaagacagaggaagaactccgcagagagatcgatgaa
ctccaccgccagcaacgagaaatttcagagcggcttcgcgatcctagggggattcgccgt
ggtggtttatcgaactccggtcctcgcaattttactgccaagcagcgtggctttgttcgg
cccgcggagagaaatgaaatggaggaccagccagcagcaaaaaagagactttcttctgct
gttgtgaagcttgaggatggggagatagctgatgatggctccgaagctgcgaaggatgtg
aaaagggaagatttacctgttgaaattgaaaatacaaatgcgagtcagagtggaaagaag
ccatctttttggccgcaacaggatggcaataagaggcccttgccctctaaaatggatttt
gaaatcgctccggcagagcatgtaccaagggtattgcctaaagatgaggatcctagtttg
gtcagcaggaataagaggatgctgggtcagcttctcgggactttggagaggttcaggaaa
gaagacaagcaactttcgggtacggaagcatacatgcgaaggtcggactctttgaaaagg
gctgaacaacgagcacgtgaagaaagtgaaaaactgaggcagcaagagcgtgagcagatt
gcagaaaagcggaaaagggacctgactctcagagcgcgtattgctgcgaaggcggaggaa
aagaaattggaattgttgtttcttcgatggagtgagcatcacaaaaaacttggaaatttc
ataaggacaaagacagagcctccgatctattacatgtttgccaagcctctggaggatcgt
gatgaagctttgcttgagcaagaaaaagaacagagttttcaagaatggaagtcttctagg
agaagtgaactatcacagtatcagaaggagattgcagaaaagtacattgcgaatgtggag
aatggtctggaaaggtggcaaaatggaagaaaagcttggatagcaaacaatgatgcgaca
aacttacaagagacaatggacaaagaacttgagacccatcagcttgagcacgggcccaaa
actagaaagatccctggacaaagcaacaacgaagatgaagatgacgtggaagatataaat
gtcgcagaggattatatgatggaggacgtgcttggtgttgatgaaaatgttcgaagggtc
gacgaagtagcgaaagcagaaacaaataatgacattgttgttgaggagaacaaagaagag
tag
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