KEGG   Primulina tabacum: 142505449
Entry
142505449         CDS       T11246                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
ptab  Primulina tabacum
Pathway
ptab03013  Nucleocytoplasmic transport
ptab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142505449
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    142505449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptab03019]
    142505449
   04131 Membrane trafficking [BR:ptab04131]
    142505449
Messenger RNA biogenesis [BR:ptab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142505449
Membrane trafficking [BR:ptab04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    142505449
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    142505449
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    142505449
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_EIPR1 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SCAP WD40_RFWD3
Other DBs
NCBI-GeneID: 142505449
NCBI-ProteinID: XP_075474547
LinkDB
Position
10:complement(2223464..2224501)
AA seq 302 aa
MPAQKIETGHNDVVHDVSMDYYGKRVATASSDATIKIIGISNNSTSQHMATLSGHQGPVW
QVSWAHPKFGSILASCSYDGKIIIWKEGNQNDWFQSHVFMDHKSSINSIAWAPHELGLCL
ACGSSDGNICVYTAQSDGSWETTRIDQAHPVGVTAVCWAPSMAPGALVGSGLLDPVQKLA
SGGCDNTVKVWKLYSGNWKMDCFPALQMHSDWVRDVAWAPNLGLPKSTIASASQDGKVVI
WTVAKEGDQWEGKVLKDFKAPVWRVSWSLTGNLLAVAAGDNNVTLWKEAVDGEWQEVTTV
DQ
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcctgcacagaagatagaaacaggtcataatgatgttgttcatgatgtttccatggat
tactatgggaaacgtgtggcaacagcatcatctgatgccactattaagataattggtatc
agcaataactcgacatctcaacatatggctaccttgagcgggcatcaagggcccgtctgg
caggtttcttgggcacaccccaagtttggttcgattctagcttcctgttcttatgacggt
aaaatcatcatctggaaggaaggtaatcagaatgattggtttcagtctcatgtcttcatg
gaccacaaatcatctatcaattccattgcttgggcgccccacgagcttggactctgcttg
gcatgtggttcctccgatggtaatatttgtgtctacacagctcaatcagatggtagttgg
gaaactacgagaatagaccaagcccaccctgtgggggtgactgctgtttgttgggctcct
tcaatggcccctggtgcattagttggatcgggactgctggatcctgttcagaagctggct
tctggtggctgtgataatactgtgaaagtgtggaaactatacagcggtaactggaaaatg
gactgtttcccggctctgcaaatgcactcagattgggtgagagacgtcgcatgggcacca
aatttggggcttccaaagtccacaatagcgagtgcttctcaggacggaaaggttgtcatt
tggactgtggcaaaggaaggtgatcaatgggagggtaaagtattaaaagacttcaaggca
ccggtttggagggtttcgtggtctctgactgggaacttgttggccgtggcagctggggac
aacaatgttacactgtggaaagaagccgttgacggagagtggcaagaggtcaccacagtt
gatcaatag

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