Primulina tabacum: 142505462
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Entry
142505462 CDS
T11246
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142505462
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142505462
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
142505462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_Vps41
zf-RING_UBOX
FAR1_N
zf-RING_16
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
142505462
NCBI-ProteinID:
XP_075474557
LinkDB
All DBs
Position
10:complement(2894561..2896048)
Genome browser
AA seq
363 aa
AA seq
DB search
MNSPFSPPPPPPLAVVYDGSATPDTVITQIPNQQDVLNRDASPSSSYGSSSSSMVIVIII
IASAIIVSASIYALLRLLSKRFHRSSRTFSASDDVVVRHDASVQISGRHCHVEENGLLDS
MPLFTFRSVTGSALTGGDCAVCLSKFEPHDQLRLLPLCCHAFHADCIDTWIVSNQTCPLC
RSTVLPSDADVLDKIASSENRGIDSFRNASGSGDSFRIEIGSISRRRGASESGDGAQRSY
SLGSFEYIVEDGFAISMGSTTHRRGTSDCTSVENEAPVGIPVTESPRDALAGEVAGGGRN
WLREYVDRLASVSISSRAMSFRSSGRLFSGSSRRSETVIAADDLEANRAGEEISELFRWI
SGV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaccattttcaccgccgccgccgccgccactcgccgtcgtctacgacggctca
gccactccggacactgtcatcacgcaaataccgaatcaacaagacgtattaaacagggac
gcgtcgccatcttcatcctacggctcttcatcatcatcaatggtgatagttattataatc
atcgcctccgccattatcgtttccgcttccatttacgccctcctccgcttgctctccaag
cgcttccaccgctcgtcccgaacattttcggcctcggacgatgtcgttgttcggcatgat
gcatctgtccagatttccggccgtcactgtcacgtggaggagaatggtttgctcgattcc
atgcctctgttcaccttccgctcagtcactggcagtgcactcaccggaggcgattgcgct
gtctgtttatcgaagtttgagccgcatgatcaactgcggttgctgccgctctgctgccac
gcgtttcatgccgattgcattgacacgtggatcgtctccaatcaaacatgcccactctgt
aggtccaccgtgctcccatccgacgctgatgtgctggataaaatcgcttcctccgaaaat
cgcggcatcgacagcttcaggaatgcgagcggaagcggtgacagtttccggattgagatc
gggagtatcagccgccgtcgcggagcttcggaaagcggcgatggagcgcagcggtcatac
tcgttaggttccttcgagtatatcgtggaagacggattcgcgatctccatggggtccact
actcatcgtagagggacttctgactgtacatcggtcgaaaacgaagctcctgttggaatc
ccggtgacagagtcaccgagggacgctttagccggagaggtcgccggcggtggaaggaac
tggctgagagagtacgttgacagacttgcttcggtttcgatttcctctcgtgcaatgtcg
tttaggagctccggaagattattctccggcagcagccgtcgcagcgagaccgtaatcgct
gccgatgatctggaagcgaaccgtgccggagaagaaatcagtgaactatttaggtggatt
tccggggtttaa
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