Primulina tabacum: 142505506
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Entry
142505506 CDS
T11246
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ptab Primulina tabacum
Pathway
ptab03440
Homologous recombination
ptab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142505506
03460 Fanconi anemia pathway
142505506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptab03032
]
142505506
03400 DNA repair and recombination proteins [BR:
ptab03400
]
142505506
Enzymes [BR:
ptab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
142505506
DNA replication proteins [BR:
ptab03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
142505506
DNA repair and recombination proteins [BR:
ptab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
142505506
Bloom's syndrome complex (BTR)
142505506
FA (Fanconi anemia) pathway
142505506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
RecQ_Zn_bind
DEAD
DUF8316
TscT
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
142505506
NCBI-ProteinID:
XP_075474631
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All DBs
Position
10:7612334..7621832
Genome browser
AA seq
617 aa
AA seq
DB search
MENQVMVLKEKGITAEYLSSTQTASAKNKVYEDLESGKPSLRLLYVTPELIATTGFMARL
TKIHSRGLLNLIAVDEAHCVSTWGHDFRPSYRKLSSLRKRLPNIPVMALTATAAPKVQED
VIESLCLQNPLVLKSSFNRPNIYYEVRFKDLLDDPYSDLCEHLKSFGNICAIVYCLERTT
CDDLAAHLSKKGISCAAYHAGLNSKLRSSTLDDWICFKTQVIVATVAFGMGIDRKDVRVV
CHFNIPKSMEAFYQESGRAGRDQLPSQSLLYYGVDDRRKMEFILGNAKSKKLHSSSSEMD
SSKKSLADFCLMIDYCEDAGCRRRKILESFGEQVSASLCAKSCDACRHPNLVSKHLKELT
TSTSFKYRNGSSQVFLSSASNLCKEQFSEFWNREDDASQSEEDISDSDEAFEIAKSVAHS
SKSLKRRLNDRIESLQQAEENYYRHENDSEKQVNKVVKNAISGTLRDSGKQKLLDAMKQN
QHIFNELRIDFCTSVETLENECYHKYGKSGKSFYLSQMASIIRWLSTTSPDKLKSRLGAE
DTTTSEVVGPKPDGLSRSSSTLNPVVSQAPHHENPGISIKSDASISQVTVLPPVPSFSEF
INSKKAIENKFSMLKKH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcaagtaatggtgttaaaagagaaagggattactgctgaatatctttcctct
acccagaccgcgagtgccaagaataaggtttatgaagaccttgaatcgggaaagccatct
ttgaggttactgtatgtgacacctgaactgattgcaacaactggttttatggcaaggctg
accaaaattcattccagaggattgctaaatcttattgcagtagacgaggcacactgcgtt
tcaacatggggtcatgatttcaggccaagctaccggaaactttcttctctaaggaaacga
ctgcccaacataccagttatggccttgactgctacagctgctcccaaagttcaggaggac
gtgatagagtccttgtgtttacaaaaccctctcgtactgaagtcatcattcaaccgccca
aatatttattatgaagttcgcttcaaagacctgttggatgatccatactctgatctttgt
gagcatcttaaatcatttgggaatatttgtgctatagtctactgccttgagcggacaact
tgtgatgacttggctgcccacctatcaaagaaaggaatttcttgtgctgcatatcatgca
ggattgaacagtaaattgcggagttctacattggatgattggatttgcttcaaaacacaa
gtaattgttgctacggtggcttttgggatgggcattgataggaaagatgtgagagttgtt
tgccactttaatattccaaagtccatggaggccttttatcaagagtcaggccgagctggt
cgtgatcagttgccctcccaaagtctattatattatggggtggatgaccgtagaaaaatg
gaattcatcctgggcaatgctaagagcaaaaagttgcattcttcaagctcggaaatggat
tcctctaagaagtccctagcggacttctgtctgatgattgactactgcgaggatgcgggc
tgccgtagaagaaagatactcgagagttttggggagcaggtatctgcatcattatgtgca
aaatcttgtgatgcatgcagacatcctaatttagtttcgaagcacctgaaggagcttaca
accagtacttcttttaagtaccgaaatgggtcctctcaagtattccttagcagtgcttca
aatttatgcaaagaacaattttcagaattctggaatcgggaagatgacgctagtcaatct
gaggaagatatatctgattctgatgaggcttttgaaattgcaaagagtgtggcacattca
agtaaatcgttgaaaagaagattaaatgacaggattgagtcattgcagcaggcagaagag
aattattaccggcatgaaaatgactcagaaaagcaggtcaataaagttgtcaaaaatgcc
atatctggaacattaagagactccggaaagcaaaagttactagacgcaatgaagcaaaac
caacacattttcaacgagttaaggattgacttctgcacatctgtcgagacacttgagaat
gaatgctatcacaagtatgggaaaagtgggaagtcattttatttgtcacagatggcaagt
attataaggtggttgtcaaccactagtcccgataagctgaaaagtagactgggtgccgaa
gatactacaacatcagaagtcgtcggacccaaaccagatggcttatcccgatcatcctcg
acattgaatccagtagtgtcacaagccccccatcatgaaaatcctggtatcagtattaaa
tcagatgcttctatttcccaggtgacagttctaccaccagttccttctttctcggagttt
attaacagcaaaaaagcaatagaaaacaaattttcgatgcttaaaaagcactga
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