Primulina tabacum: 142517652
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Entry
142517652 CDS
T11246
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
ptab Primulina tabacum
Pathway
ptab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142517652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142517652
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142517652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
CCDC-167
Motif
Other DBs
NCBI-GeneID:
142517652
NCBI-ProteinID:
XP_075476126
LinkDB
All DBs
Position
11:complement(1878336..1895308)
Genome browser
AA seq
2038 aa
AA seq
DB search
MPLFLSDEEFQRLSHDASLVADKADVFIREIYNQLETAKAEADAAAITAEQTCSVIEQKY
VALTAELSFLQSQHSELITALDKRDLEFGQLQSNKQQFLLQSVEKDGLIERLKLEGSELH
KSKRQLMDILEQKDLEISEKNATIKSYLDKLVNFSEIGASKEAHQADLESELARLNATTS
RLLQEKELLERHNSWLNEELMAKVDDIIQLRKENGELEADMSSKLADAVSEYKLSADSLK
FHKDKVSELEEKLASMEEELLSTKKEAAAAEQHFTAEISTVTKLLDLYKESSDEWSKKAG
DLEGVIKALETHLNQVEDEHKERLGKEEFTMKQMEMESDELKEKLQTCEAELERLRKENE
LKHPSLSDFTANSWMDLVDTGELVEDDRAIVPKIPGGVSGTALAASLLRDGWSLAKMYAK
YQEAADALHHEELGRKQTQAILERVLYEIEEKARVIMDEREEHERLVEAYSALDQKLQHS
LSEHSDLETNIRELKASLKRQERDRAVAQKEIVQLQKQVAVLLKECRDVQLRCGYVAYDD
EMITVPVQLNAESDAESILSVRLLTFKDISGLVEQNSQLRSLAHDLSQQIEKKEAELKEE
YEMELQKHTADTASKVNAVLQKAEEQGQMIESLHASVAMYKKLYEEGELKLRTAYRLPTE
TAPELGSQKVIQLRESSLESSSKIPEQAFERVKSLEEELSKSKSGLISLRAECDKLSLEA
RFAKEKLARFMKEFEHQREEHNRVLARNVEFSQLIVDYQRKVRESSDSVNDSNKLSQKLT
MEVSILKHEKEILQNSETRAFDEVRSLSERVHRLQASLDTIQSTQEVREEAKSIERRKQE
EYVKKIEQEWAEAKRELQQERDNARNIALERESTLNSAFRQVEELRKELASALQSVAAVE
LRAAVAEARCADSAKIMEPSRVKDSDSVEGDPSSSASEKILANFREEIENLRGEARSSKD
HMLQYKSIAQVNEAALKQMELAYENFRTEANDVRKSLEAELLSLKGQAKELENECKLKTE
EAISASARNEEALTGALLEISSLKEDCSVKMSQILLMESQFSTLKENLEQEHQRWLSAQA
NYERQVILQSETIQELTKTSQALASFQDEVSELRKVADVLRNENNELKSKWETEKLALEV
YKNVADSKYDEVNELNKILHSRLEALHIKSAEKERGIASGSTSQTRTDDDGLQNVMNYLR
RSKEIAETEISLLKQEKLRLQSQLESVLKSSEDAQTSLRSERAKSRSSLFTEEDFKSLQL
QVRELTLLRESNAQLREENRHNFEECQKLREALQKDKNEIGNLEKLLRSRETDLEACRKE
IDMQKMEKVHLEKRINELVEKCRDVDVNDYNRLKESSQLMQSNLREKDAQIEELEKKMSE
KQDSASHLEQDLAMCRTELNERDTKISELLQSEASLKSEAEKYKRLNIQGRRKFENLLKE
KEDQIKEMQAQVKQLEDAKQAKRNLGDSAGEQALKEKEKEKDSRIQTLERALERHREELR
KEKEDHLKEKEKSQKIRKTILDSREIVEQQKIKLTDELRNHKEALKALQDEVEKLKGSGG
SQSESTSVVQQFSSTILDDMSSAYFQAVENFEQVVQPACDELEPASAKDAPAPSLENTSA
VGASTGQSIALVSQIPSASASNVASKTVEEKERRFGLGKANARTARKLVRPNITKPKEPQ
SDVDMSEAYEINPLSSSQNAETQESAALPTAPLVRKRSSASILSDGQEMPVPEEAIPDMV
APVVKKAKGSESLQDGGEEKPASPSKLVEVVLTEESSDDVVNIRQSVNEELVDAEKDEFE
NVEEQIEEPTVDEQIHSDPANEAGAGEVADEKSDKPSETVLSPELLRDQIEQDIQQIVTE
FGSDVEEGEMVADLADNDGDSYIPGSRQLPAEQSVEPENSPGMEPFIPVTFDIGEIDPPL
TPEEKNDGGDVIGNIVESSDKLNDGSDTGGETDQFSGAVTTTTDDVDPAASEQGDTGGKP
VSPLNSSSTTINLQERARERGHLRQLGRNISSSSRPHTRVVRVRGNRGGRNGRGQPRG
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttctgtctgatgaagaattccagcggctatctcacgacgcctcactggtg
gcggataaggcggacgttttcattcgagaaatttacaatcaacttgaaaccgccaaggca
gaggctgatgcggccgccattacagcagagcaaacttgctctgtaattgaacagaaatac
gttgctcttacagcggagctttccttcctccaatcacaacactccgaactcatcaccgcc
cttgataaacgtgatcttgaattcgggcaactacaatccaacaagcaacaattcctcctc
cagtctgttgaaaaggatgggttgattgaaagattgaagctggagggatcggagctccat
aaatcaaagaggcaattgatggacatcctggagcagaaggatttggaaatcagcgagaaa
aatgccaccattaagagctatcttgataagcttgtcaacttttctgagatcggggcatca
aaagaagcacatcaagctgacctagaatctgaattggcgcgattgaatgctacaacatcc
cgccttttgcaggaaaaggagcttcttgagaggcataattcatggctaaatgaggagtta
atggccaaggtggacgatatcatccaactgcggaaagagaacggggaacttgaggcagat
atgtcttccaagcttgctgatgctgtaagtgaatataaactgagcgctgattctttgaag
ttccacaaggataaagtgagtgaattagaggagaagcttgcatccatggaagaggagtta
ctgtcgactaagaaggaagctgcggcagcagagcagcattttacagccgaaatttcaact
gtcaccaaactcctggatctgtacaaggaaagttctgacgaatggtcgaaaaaggctggg
gatctcgagggagtaattaaggctttagaaactcatttaaatcaagtggaagacgaacat
aaggagaggcttgggaaggaagagtttacaatgaagcaaatggaaatggaatcggatgag
ttgaaagagaaacttcagacttgtgaggcggagctagaacgtttgaggaaagaaaatgag
ctaaagcatccttctctgagtgattttacagctaattcatggatggacttggttgatacc
ggtgaattggttgaggatgaccgagcaattgtaccaaagattccgggcggggtttcagga
acagcgttagcagcttcactccttagggatggatggagtctggccaaaatgtatgccaaa
tatcaagaagctgctgatgcactgcatcatgaggaactgggaagaaagcaaacacaagct
atattggagcgggtactttatgaaatagaagaaaaagctagggtcatcatggatgaacga
gaggaacacgaaagattggttgaagcttactccgctcttgaccaaaaactgcagcattcc
ctatccgaacattctgatttggaaacaaatattcgagagctgaaggctagcttgaagagg
caagagcgtgatcgtgctgttgctcagaaggagatcgttcaacttcagaagcaggtggct
gttcttctgaaggaatgtagagatgttcagttgcgttgtggatatgttgcctatgatgat
gagatgattactgttcctgtgcagttgaatgctgaatcagatgctgaaagtattttatct
gtgaggctgttgaccttcaaggatattagtggattagttgaacaaaattcccagctgcgg
agccttgctcatgacctttcacaacagattgagaaaaaagaagcagagttaaaggaagag
tatgagatggagcttcagaaacatacagctgacacagcatctaaagttaacgcggtgttg
caaaaagctgaggaacagggacagatgattgaatcacttcacgcctctgtggcgatgtac
aagaagttgtatgaagagggagaacttaaacttcgcacggcttatcgtctacccacggaa
acagcaccagaacttggaagccagaaggtcatacagttaagagaaagcagtcttgaatca
tcaagtaagataccagaacaagcttttgagcgtgtgaaaagtcttgaggaagagttatca
aaatccaagagtggcctaatatcacttcgagctgagtgcgataagctgtctctggaagca
cgatttgccaaagaaaaactggccagattcatgaaggaattcgagcatcagagagaagaa
cataatagagtcctagctagaaatgttgaattctctcagttgatagttgactatcagagg
aaagtacgtgaaagttccgattctgtaaatgactccaataaactttcccagaagttaaca
atggaggtctcaatattgaagcatgaaaaggaaatactgcagaactctgagacgagagct
tttgatgaagttcgtagtttgtcggagagggttcaccgtttgcaggccagtttggatacc
atacaaagcactcaggaagtccgtgaggaggccaaaagtattgagaggaggaagcaggaa
gagtatgtaaaaaaaattgagcaagaatgggctgaggcaaaaagggagcttcaacaagag
cgagataatgctcgaaatattgcactcgagcgtgaaagcaccttgaatagtgcctttaga
caagttgaagaattaagaaaagaattggccagcgcattgcaatccgtagctgctgtggag
ttgagagctgctgttgcagaggctcgttgtgctgattcggcgaagattatggaaccttct
cgagtgaaggattctgactctgtcgaaggtgatccatcctcttctgctagtgaaaagatt
ctggcaaacttccgtgaggaaattgagaatttgagaggggaggcacggtctagcaaagat
cacatgcttcagtacaagagcattgctcaggtaaatgaagcagccctcaaacagatggaa
ttggcctacgaaaattttagaactgaggccaatgatgtgagaaaatctcttgaagccgag
cttctttcacttaaagggcaagccaaagaacttgaaaatgaatgcaaattgaagactgag
gaggcaatttctgcatccgctaggaatgaagaagctcttactggtgctttattggaaatt
tcgagtctgaaagaagattgctcagttaaaatgtcacaaatcttgttgatggaatcacaa
ttctccactctgaaagaaaatttggagcaggagcatcaacggtggctttctgcccaagcg
aattatgaaagacaggttattctacagtcagaaacaatacaggagttgactaaaacatca
caggcattggcttcatttcaagatgaagtatctgagctccgcaaagtggcagatgtgctg
agaaatgagaataatgagctgaagtcaaaatgggagacagaaaagttagctctggaagtt
tataagaatgtggccgatagtaaatacgatgaagtcaatgagctgaacaagatcttgcac
agtcgccttgaagccttgcacatcaaatcagctgagaaagaaagaggaatagcttctgga
agcacttcccagactcgtactgatgacgatgggttgcaaaatgttatgaattatctccgg
cggtcaaaggaaatagccgaaacagagatttctttgttgaaacaagagaagcttcgattg
caatcacagctagagagtgttttgaagtcatcagaggatgcacaaacatcacttcggtca
gagagagctaaatctcgatcctcattattcacggaggaagacttcaaatctctccaactt
caggttagagagctgacactacttcgggagagcaatgcacagctcagagaggaaaaccgg
cataattttgaagaatgtcagaaactccgtgaagcattacagaaggataagaatgaaatt
gggaatttggagaaacttcttcgaagcagagaaactgatttggaagcttgtagaaaagaa
attgatatgcagaagatggaaaaggtacatcttgaaaagagaattaatgagttggtggaa
aagtgtagggatgttgatgttaatgattacaatcgcttgaaagaatcttctcagctgatg
cagtcgaatttaagagagaaggatgcacaaatcgaagaacttgagaaaaaaatgtccgag
aaacaagattcagcgtcacatttagaacaggaccttgccatgtgcagaacagaattgaat
gagagagataccaagattagtgaactcttgcaatctgaggcttcgctgaaatctgaggct
gaaaaatataagcgattaaatattcagggaaggaggaagttcgaaaacctgttgaaggag
aaggaagatcaaatcaaagagatgcaagcgcaggttaaacaattagaagatgccaagcag
gctaaaagaaatttaggggattctgcaggcgaacaagctctgaaagaaaaagagaaggag
aaagactccagaatacagactttggagagggcgttggagaggcacagagaggagttgagg
aaggagaaagaagaccatctcaaagaaaaagaaaaaagtcagaaaattcgtaaaacaatt
cttgactctcgtgagattgtcgagcagcagaagattaagctcacagatgagctaaggaat
cacaaggaagctctgaaagcgcttcaagatgaagtggagaaactaaagggctctggaggc
agtcaatctgagagtacatctgtggttcaacaattttccagtaccattttggatgatatg
tcatcggcatacttccaggctgtagaaaattttgaacaggttgtgcaaccagcttgtgat
gaacttgaacctgccagcgctaaagatgctccggctccctctctcgaaaatacgtcagct
gttggagcttcaactggtcagtcgatagcgttagtgtcccaaattccatcagcttccgct
tctaacgttgcttcaaaaactgtggaagagaaagagagaagatttggtttaggaaaggcg
aatgctagaacagcaaggaaactggtccgtcctaacattacgaaacctaaagaacctcag
agtgatgtggacatgtcagaagcatacgagattaatcccttgtcatcttcgcagaatgca
gaaactcaagaaagtgcagccctaccaacagcgccgcttgtgcggaagcgttcatcagca
tcaattttatctgatgggcaggagatgcctgttccagaggaagcaatccctgatatggta
gctcctgtggtgaaaaaggcaaaaggttcagagagcctacaagatggtggtgaagaaaag
cctgcctctccttcgaagcttgttgaggttgtactcactgaagaatcatcagatgatgtg
gtaaacattcggcaaagtgttaatgaggaactggttgatgcagaaaaggatgagtttgaa
aatgtagaggagcagattgaagaaccaacagttgatgaacagattcattcagatccagcg
aatgaagcaggagcgggtgaagttgcggatgagaaatcagacaaaccaagtgagactgtc
ctgtctccggagctattgagagatcaaattgaacaagacatccagcaaatagtaacagaa
tttggctctgatgtggaagagggagagatggttgcagacttggcggataatgatggtgat
agctatatcccaggatctagacaacttccggctgagcaatcggtagaaccagaaaattca
ccaggaatggaaccctttattcctgtaacctttgacatcggggagattgatcctcccctg
actccagaggagaagaacgatggcggtgacgtgattggaaatattgttgaaagttcagat
aaacttaatgatggaagcgatacaggtggagaaacggatcagttttctggggctgtaact
actaccacggacgatgtagatcctgcggcttctgaacaaggtgatactggagggaaacca
gtatcacctctaaatagcagctcaactactattaatttacaggagagggcaagggaaagg
ggacatttaagacagttaggcagaaacatttcttcctcgagccgacctcatacaagagta
gttcgtgttcgtggtaatcgtggcggccgcaatggacgaggacaaccacgtggttaa
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integrated database retrieval system