Primulina tabacum: 142517655
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Entry
142517655 CDS
T11246
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ptab Primulina tabacum
Pathway
ptab00600
Sphingolipid metabolism
ptab01100
Metabolic pathways
ptab04382
Cornified envelope formation
Module
ptab_M00094
Ceramide biosynthesis
ptab_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
142517655
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142517655
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptab01007
]
142517655
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
142517655
Amino acid related enzymes [BR:
ptab01007
]
Aminotransferase (transaminase)
Class II
142517655
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Aminotran_5
AF2212-like
Motif
Other DBs
NCBI-GeneID:
142517655
NCBI-ProteinID:
XP_075476129
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All DBs
Position
11:complement(39063037..39069084)
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AA seq
485 aa
AA seq
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MDTMLAAFESMAKSFSDWVTLVLDAPSTRAVIFGVPIGGHLFVEGLLLVVILFLVSQKSY
KPPKRPLTKKEIDELCDEWVPESLIPSITKEMKYEPPVLESAAGTHTVINGKEVVNFTSA
NYLGFLGHEKLQESCTKALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTTDSILYSY
GLSTMFSTIPAFCKKGDIVVVDEGVHWGIQNGLHLSRSTIIFFKHNDTKSLQSILEKVTH
ENKRAEKLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVILDESNSIGVLGSSGRGLT
EHCRVPVEKVDIITAVMGHALASEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAI
TAIDILEESPNLLTKLKENVAILHKGVSEIQGLETTSDPQSPIVFLRLKKSAGFLKADLQ
VLQDICDHLLKDYSIFVATSKRSTVDKCKLPAGIRLYVSAAHTESDLRNACKSLKKVADF
VLAEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatacaatgttggcggcatttgaaagtatggcgaagtcattttcagattgggtgaca
ttggtacttgatgcaccttctactcgagctgttatctttggagttccaattggaggccat
ttgtttgtggagggtcttctcttggttgtaattctttttcttgtatcccaaaaaagttat
aagccaccaaaaagaccattgacgaagaaggaaatagatgagttatgtgatgaatgggtc
ccggaatccctcattccttctattactaaagagatgaagtatgaacccccggtattggaa
agtgctgctggaacacatactgtaatcaatggtaaagaagttgtgaatttcacatcagcg
aattaccttggctttttagggcacgaaaagctacaagagtcatgtaccaaagcgctggaa
aaatacggtgttggttcttgtggtccacgtggattttatgggacaattgatgttcacctt
gattgtgaggccagaatagcaaagtttcttggaaccactgactctatactttattcctat
gggctttccacaatgtttagtacgattccagcattttgtaagaagggtgatattgtcgtc
gttgatgagggagtccactgggggatacaaaatggccttcacctctctagaagtacaata
atttttttcaaacacaatgatacgaagtccttacagagtattttggagaaggttacccat
gaaaacaaacgagcggagaagcttaggcgctatatcgttgtagaagcaatatatcagaat
tctggtcaaatcgctccattggatgaaatcatcaaactgaaggagaaatatagattccgt
gtaatcctagatgaaagcaattctattggtgttcttggaagttctggtagaggcctaacc
gaacattgcagagttccggttgagaaggtagatattattactgctgtaatggggcatgca
ttggccagtgaaggaggattttgtactgggagtgcccgagttatcgatcatcagcgtctc
agtagttctggttatgtattttctgcctccttgcctccttatctggcaagtgctgcaatt
actgccatcgatatcttggaagaaagtccaaatcttctcacaaaattgaaggaaaatgta
gctattttacataaaggtgtgtcagagatacaaggacttgaaacaacaagtgatccacaa
tcacccatagtttttcttaggctcaaaaagtcggcaggattcttgaaggcagatctacaa
gtgcttcaagatatttgtgatcatttattgaaggactactccatttttgtggcaacttcg
aaacgatccacggttgacaaatgcaaattacctgctggaattaggctgtatgtgtctgct
gctcatacggaatccgatctaagaaatgcatgcaaatcattgaagaaagttgctgatttt
gtattggcagaagaatga
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