Primulina tabacum: 142517724
Help
Entry
142517724 CDS
T11246
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ptab Primulina tabacum
Pathway
ptab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
142517724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142517724
Membrane trafficking [BR:
ptab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
142517724
Hops complex
142517724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
VPS18_RING_C
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
142517724
NCBI-ProteinID:
XP_075476234
LinkDB
All DBs
Position
11:complement(15099847..15104700)
Genome browser
AA seq
960 aa
AA seq
DB search
MYQWRKFEFFEEKKSRIPDEVEGGIRCCSSGRGKIVLGSENGTVSLLDRGFQLQYSFQAH
SSSVLFLQQLKQRNILVTVGEEEQIPPQQSVTCLKVFDLDKRVEEGPSSPSPDCVQILRI
FTNQFPAAQITSFLVFEETPPIIFIALGLDNGGIYCIQGDFARERIKRSKLEVDSSHFDK
KQFSITGLGFRVDGQAFQLFAVTPSSVSLFNLQNQPPNRQTLDHIGSSTIGVALSDRSEL
IIGRHEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVITDHRTGKNTFNVYDLKNHLI
AHSIVVQDVSHMLCEWGSIVLIMADKSALFVVEKDMESKLDMLFKKNLYTVAINLVQSQQ
ADAVATAEVLRKYGDHLYGKQEYDEAMAQYILTIGHLEPSFVIQKFLDAQRIYNLTSYLE
KLHEKGLASKDHTTLLLNCYTKLKDVEKLNIFIKSEDGAGEHKFDVETAIRVCRAANYHE
HAMYVAKKAERHEWYLKILLEDLGRYDEALQYINSLEPSQAGVTVKEYGKILIEHKPRET
NEILMRLCTEEGELTKRGFSNVTFLSMLPSPVDFLNIFVHHPQSLMEFLEKYTDKVKDSP
AQVEIHNTLLELYLTRVLEFPSLSQTAISENSDHRTGRVSHAPAISNVASNGRINLIQNN
VDEDKDLHERHQKGLLLLKSAWPSEQEQPLYDVDLAIILCEMNSFKEGLLYIYEKLKLYK
EVISCYMQAHDHEGLIACCKRLGNLDKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIE
RDDILPPIIVIQTLSRNPSLTLSVIKDYVARKLEQESKLIDENRTAIEKYQEETSAMRKE
VHDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEIECPECAPEYRAVLD
MKRSLEQNSKNQDCFFQQVRTSKDGFSVIAEYFGKGIISKTSTEPSDALQTTKSYSNGNF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaaattcgaattcttcgaggagaagaaaagccggattccggacgaa
gttgagggaggaattcggtgctgctccagcggcagaggtaaaattgtattgggttccgag
aacggcaccgtttcgctgctcgatcgcggcttccagcttcaatactcctttcaagctcac
tcatcctctgttctcttcctccagcaacttaagcaaaggaacatcttagtgacagttgga
gaggaggaacaaataccaccacaacaatcagttacatgcctaaaagtatttgacctcgat
aaaagggtagaagaggggcccagttcaccgagtccagattgtgtccaaattctgcggata
tttaccaaccaatttcctgcagcacagatcacatcttttttggtttttgaggaaactcca
cctatcatattcattgcccttggattggacaatggtggtatttattgcatccagggtgac
tttgctcgtgaacgcattaaacgctccaagcttgaggtagatagcagtcattttgacaaa
aaacagttttctattacgggattgggattccgagtggatggtcaggcctttcagctattt
gctgtcactccaagttcagtgagtttgtttaatttgcaaaatcaaccacccaacaggcaa
actcttgatcacattggatcttcaacaatcggtgtagcattaagtgatcgctcggaatta
atcatcggcaggcatgaagctgtctatttttatgaagttgatggtcgaggcccttgttgg
gcttttgagggtgaaaaaaagctacttggttggtttcgtggttaccttttgtgtgttatt
acagatcatagaactggtaagaatactttcaacgtctatgatctgaagaaccacttaata
gctcacagcatagtagttcaagacgtttctcacatgctgtgtgaatggggtagtatagta
ctcataatggcagacaaatcagctctttttgttgttgaaaaggatatggagagcaagctg
gatatgcttttcaagaaaaatctttacactgtagctattaatcttgtccagagccagcaa
gctgatgctgtggcaactgctgaagttctgaggaaatatggtgatcatttatatggaaaa
caagagtatgatgaagcgatggctcagtatatccttaccattggccatctcgaaccttcg
tttgtcatacagaagtttttggatgctcagaggatctacaacctgactagttacttggaa
aagttgcatgaaaaaggccttgcttccaaagatcatactactctcttgctaaactgttac
acaaaacttaaagatgtcgagaagttgaatatattcattaaaagtgaggatggtgcaggg
gaacataaatttgacgtggaaactgctatacgggtctgtcgcgcagccaattaccatgag
catgcaatgtatgtagccaagaaggctgaaagacacgaatggtatcttaaaattttactt
gaggacctaggtaggtatgatgaagctctgcaatatataaatagccttgaaccgagtcaa
gctggggtcactgttaaagagtatggaaaaattctgatagagcacaagccaagggaaaca
aatgaaatactgatgagactttgcaccgaagagggggaactgaccaagaggggtttctca
aatgttacctttttatccatgctgccatctcctgttgattttctcaacatttttgtgcat
cacccacaatctcttatggaatttcttgaaaaatataccgacaaagtgaaggattcacct
gctcaagtggaaatccataataccctgttggagttatacttaactcgagtcttggaattt
ccatctctttcacaaactgcaataagtgagaacagtgatcatagaacgggtagagtgtca
catgcacctgcaatttcaaacgttgcatcaaatggaaggataaatttgattcagaacaat
gtagacgaggataaagatctccacgagaggcatcaaaaggggctactcttgcttaaaagt
gcttggccatctgaacaggagcaaccgctgtatgatgttgatctcgcaattattctctgt
gaaatgaactcttttaaagaagggctcctatatatttacgagaagttgaaattatataaa
gaagtgatttcgtgctatatgcaagcgcatgatcacgagggtttaattgcatgttgcaag
agactaggaaatttggataagggtggtgacccatctctttgggcagatctattgaagtat
tttggcgaacttggtgaagattgctccaaagaagttaaagaagtcttgacatatatcgaa
agggatgacatcttgcctccaattatagttatccaaaccttgtccagaaaccccagcctc
actctttctgtaattaaagattatgtagctcgaaagctggaacaggagtcaaagctgatt
gatgagaatcggacagctattgaaaagtatcaggaggaaacatcggcaatgagaaaagaa
gtccatgatctcagaacaaatgcaagaatcttccagcttagcaagtgcacagcctgcact
ttcaccctagaccttcctgcagtccatttcatgtgcatgcactcattccaccagcgttgc
ttaggtgacaatgaaatagaatgccccgagtgcgctcctgaataccgagccgttttagac
atgaagaggagcttggagcagaactcgaaaaaccaagattgtttctttcagcaagtcaga
acttcaaaggatggtttttcggtgattgcagaatatttcgggaaagggatcatcagcaaa
actagcactgaaccttccgatgctcttcaaacgacgaaaagttattcaaatggtaacttc
tga
DBGET
integrated database retrieval system
