Primulina tabacum: 142517878
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Entry
142517878 CDS
T11246
Name
(RefSeq) uncharacterized protein LOC142517878 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142517878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142517878
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142517878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Vps36-NZF-N
Zn_ribbon_RanBP
AAA_22
Motif
Other DBs
NCBI-GeneID:
142517878
NCBI-ProteinID:
XP_075476487
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Position
11:4103700..4110365
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AA seq
625 aa
AA seq
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MPRKVKYGVDYDDDYGVAGGFGDGYDYEDDYEELLEEDETNFVSGIPEIMAKQELLGTEV
WHCPICAFDNKDSMSSCYICGVLRNPLRKKINSSSCIAADLISSEKEIKTLSQLAAEGTD
TSSALVSKGRFSGVNKKQSASGSGNYPDNSFTSKNNGSLSSESRNTDIINEQNVASLPEY
KPESWMIPDKVDDGLSQLNLAIVGHVDSGKSTLSGRLLHLLGQISQKEMHKYEIEAKQQG
KGSFSYAWVLDESVEERERGITMTVAVAFFKSRRYRVVLLDSPGHRDFVPNMISGATQAD
AAVLVVDASMGSFEAGLDANGGQTREHAQLIRSFGVDQIIVAINKMDVVQYSKERFDVVK
HKLGPVLRSCGFKDSSISWIPLSAMENQNLVANPSDVRVSWFKGHFLLDAIDSLQLPARD
YFKALVMPICDVMKSQSQSQVSACGKLESGAIRTGFKVLVMPSRKLATVRSLEHNSQVCD
VARAGDNVTVNLHGIEGNRVTAGGVICHPDFPVPVANHLELKILVLDISTPILIGSQLEI
HIHHAKEAARVVKILTLLDPKTGKETKKSPRCLLAKQNAVVEVVLQESICVDEYSNHRAL
GRVSLRALGRTIALGVVTQIIKREE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtaaagtgaaatatggagttgattatgatgatgactacggtgtcgctggtgga
ttcggtgatggctatgactacgaggatgattatgaagaattgctggaagaagatgagact
aattttgtgtctggtatccctgagataatggcaaaacaggaactcctcgggacagaggtg
tggcattgcccaatatgcgcttttgataacaaagatagcatgtcttcatgttacatatgt
ggagttttgcgtaatcccttgagaaaaaaaattaatagcagcagctgtatcgctgcagat
ctgatctcaagtgaaaaagagataaagacactgtctcaattggctgctgaagggacggac
acctcttcagctttagtgtcaaaagggagatttagtggggtgaataaaaaacaatctgct
tcaggcagtgggaactatcctgataattcttttactagtaagaacaatgggtctttatct
tctgaatctagaaacactgacattatcaatgagcaaaatgtagcatcacttccagaatat
aagccagagtcatggatgattcctgacaaagtagatgatggattgagtcaacttaatctt
gcaattgttggccatgttgattctggtaaatcaacactttcgggaaggttgcttcacctg
ttagggcaaatatcccagaaggagatgcacaaatatgaaatagaagccaaacaacaggga
aaagggtctttctcttatgcatgggtgctagatgaaagtgttgaagaaagggagaggggt
ataactatgactgtggcggttgcttttttcaaatctagaagataccgtgttgtgctactt
gattctcctggccatagagactttgttccgaacatgatatctggagcaacccaagcagat
gctgcagttcttgtagtagatgcttccatgggctcatttgaagcaggtctggatgctaat
ggagggcaaacgagggaacatgcacagctaattagaagctttggagtcgatcaaataata
gttgcaatcaacaaaatggatgttgtgcaatactctaaggaacgatttgatgtggttaag
cataaattaggaccagttcttcgctcttgtgggttcaaggattcatctatatcatggatt
ccactaagtgccatggaaaaccaaaacttggtggctaatccttctgatgtacgggtctct
tggtttaaggggcattttttgttggatgcgatagattccctccaacttcctgcgagagat
tacttcaaggctcttgttatgcctatatgtgatgttatgaaatcacagtcacaaagtcag
gtctctgcctgtggtaaattagagagtggagctatcagaactggtttcaaggtacttgtt
atgccttcaagaaaattagcaactgtccgttccttggaacacaattctcaggtttgtgat
gtcgcaagagctggtgataatgttactgttaatttgcatggtattgagggcaatcgtgtg
acagctggaggtgttatttgtcaccctgatttcccagttcctgttgcaaatcacttggag
ctcaagattcttgtcctggatatatctactccaatcttaattggttcccagttggagatt
cacatacaccatgcaaaagaggctgctcgggttgtgaagatattgacactgctagatcca
aagactgggaaggagacaaagaaatccccgagatgtttattagctaagcaaaatgcggtg
gttgaggtggttctgcaggagtccatttgtgtggatgagtacagtaaccatagagctctg
ggaagggtgtccctgagagcattgggaaggactattgctcttggtgttgtaactcaaatt
attaagagggaagaatag
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