Primulina tabacum: 142517954
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Entry
142517954 CDS
T11246
Name
(RefSeq) cryptochrome-1-like
KO
K12119
cryptochrome 2
Organism
ptab Primulina tabacum
Pathway
ptab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
142517954
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
142517954
NCBI-ProteinID:
XP_075476605
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Position
11:complement(5059284..5063345)
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AA seq
649 aa
AA seq
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MESNCKSIVWFRRDLRIEDNPALAAAARDGSVLPVFIWCPKEEGQYLPGRVSRWWLKQSL
IHLEQSLKSLGAELVLIKAQSALSALLDCISAVGATKVVFNHLYDPVSLVRDHNIKQKLS
DMGVSVQSYNGELLHDPWEIYNDDGNAFTTFKAFWNKCLDMQIEPGTHIPPCRLVPAAGK
VGNCSIEALGLEDESEKSSNALLGRGWSPGWTNSIKAFTEFVENHLLNYSKDRLRVGGNC
TSLLSPYLHFGELSVRKVFQCIRMKQIVWKNEQNSVGEESANRFLNAIGLREYSRYICFN
FRFTHERSLRGNLKFFPWNADQARFKAWRQGRTGYPLVDAGMRELWATGWIHNRIRVIVS
SFFVKFLLLPWQWGMKYFWDTLLDADLESDILGWQYISGSLPDGHEIERMDSPQVQGFKF
DPDGEYVRQWLPELARIPTEWIHHPWDAPLIILTSAGVDLGSNYPNPIVDVDSARVGLTE
AISIMHKNEAAANANGTDEVVFDNSETYANWSIPNVVVKGRTPFSAISSYDQRVPSMQNS
RNKKRQARGKDEGNLHRRSDGGETSKMDDDLCSTAESSSNKKRATSSIYSFSVPQCCSTV
SKGSSAQVQDSSDPMNRWQEEIDSEKMMNENGSTHLHASRDNEEERSLI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaattgcaaaagcatagtgtggtttaggagggatttgaggattgaagacaat
cctgctttagctgctgctgctagggatgggagtgtattaccagtttttatatggtgtcct
aaagaagaaggccaatatttacctggtcgagtttcacggtggtggcttaagcaatccctt
attcatttggagcaatctttgaaatctctcggggctgaattggtgctgatcaaagcacag
agcgctctttctgctctattggattgcataagtgctgtcggggccacaaaagtcgtattt
aaccatctctatgatcctgtttcacttgtccgtgatcacaatatcaaacaaaagttgagt
gatatgggagttagtgttcaaagctacaatggcgagctattgcacgatccttgggaaata
tacaatgatgatggaaatgcttttacaacatttaaagcattttggaataaatgcttagac
atgcaaatcgaacccggtacgcatattcctccctgccgattggttccagctgcaggaaaa
gttgggaattgttctattgaggcgttgggtcttgaagatgaatctgaaaagtcgagtaat
gcattactgggaaggggttggtcaccaggttggaccaattctatcaaggcttttaccgaa
tttgtagaaaatcatctgctcaactactcgaaagataggctcagggttggggggaactgc
acgtccctcttgtccccataccttcattttggtgagctaagcgtaagaaaagttttccag
tgtatacggatgaaacaaatagtttggaaaaacgaacaaaattcggtgggggaagagagt
gcaaatcgttttctcaatgccattggattaagggagtactcccgatatatatgttttaat
ttccgatttactcatgagagatcattgcggggaaacctgaaattttttccctggaacgct
gaccaagcacgattcaaggcttggcgacagggtcgaacaggttatccgctagttgatgct
ggaatgagagagctctgggctacaggatggattcacaataggataagagttatagtttca
agcttctttgtgaagtttcttctcctaccatggcaatgggggatgaagtatttctgggat
actcttctggatgcagacctggaaagtgatatcctgggatggcaatacatctccggaagt
ttgcctgatgggcatgaaatagagcgaatggatagtccacaggttcagggattcaagttt
gatccagatggtgaatacgttaggcagtggttaccagagttagcacgaattccaaccgag
tggattcatcatccatgggacgctcctcttatcatactcacatctgctggagtagacttg
gggtccaactaccctaatcctatagtcgacgtagattcagcaagggttgggctaacagaa
gccatatcaatcatgcacaagaacgaagcagcagcaaacgccaatggaacagacgaagtg
gtctttgataactctgagacctacgcaaattggtccattcctaacgtagttgtgaaggga
aggactccattttcagctatttcatcttacgatcaaagggtgccgtctatgcagaattca
agaaacaagaagagacaggcacggggtaaagatgaaggcaatttgcatcgcagaagtgat
ggaggtgaaacctcgaaaatggacgacgatctgtgctcgacggctgaatcttcttcgaat
aaaaaacgggcaacaagcagtatatattcattctctgttccccaatgttgttcaacagta
tcaaagggctcatcagcgcaggttcaagattcctctgatcccatgaacagatggcaagag
gaaatcgactctgaaaagatgatgaatgaaaatggatccacccatttgcatgcttcaaga
gataatgaggaggaaagatcattgatttga
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