Primulina tabacum: 142518100
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Entry
142518100 CDS
T11246
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ptab Primulina tabacum
Pathway
ptab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142518100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptab03019
]
142518100
Messenger RNA biogenesis [BR:
ptab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
142518100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
142518100
NCBI-ProteinID:
XP_075476892
LinkDB
All DBs
Position
11:2268349..2271719
Genome browser
AA seq
505 aa
AA seq
DB search
MNGGSDCLKKSSNSHFMLIAYCYWVPALFSWIEKMEVDQGKLFIGGISWDTNEDRLTEYF
GAYGEVMEAVIMRDRSTGRARGFGFVVFADPMVAERVVKEKHVIDGRTVEAKKAVPRDDQ
YLITRNHGNSIRGSPGPGQTKKIFVGGLASSVTEADFKNYFNHFGNITDVVVMYDHITQR
PRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRAVPKELSHGPSRSPVIGYNYGFSRT
NNLLTSHAPGYNLGSLGAYGIRMDGRFSPLASARAAFSNLGSPTYGTNLGAGQGMNACFA
GASSGSRNDIGSGHAVNSYFNNNQGRYNTPICYNANNSRRDSFLHSLSTNTWGNAGLNTS
PNNVNFVPYSGSETGDFGVFGNSRQNWGGSPFATLFGGSSSVYRGGENSNSLGAVGLGRN
GGMGAATTSSFAASGGGFEGSFRDFYQGGANYGDSTWQTASSELNGSDSFGYGLGHSEED
FAKDSDYMVGYSIPTSRSSRDATGV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggatccgattgtttaaagaaatccagtaattcccactttatgttgattgct
tactgctactgggttcctgccttattttcttggattgaaaagatggaggtggatcaaggt
aagctctttattggtgggatttcttgggacaccaacgaggatcgccttacagaatatttt
ggagcgtatggagaagtgatggaggcagtcattatgagggatcgttctactggacgtgct
cgtggcttcggttttgtagtgttcgccgatccaatggttgccgaaagagtagtcaaggag
aagcatgtgattgatggacggactgtggaagccaagaaagctgttccaagagatgatcaa
tacttgataactcgaaaccatggcaacagcatccggggatctcctggacctggacaaacg
aaaaagatttttgtaggaggattggcatcttctgttactgaggctgacttcaaaaattac
ttcaatcactttggtaacataacagatgttgtagtgatgtatgatcacataactcaaaga
ccgagaggtttcggattcataacgtatgattcggaggatgctgtggatcgggtgttgcac
aaaacctttcatgaacttaatgggaagatggtggaggtaaaacgagcggttccaaaagaa
ttgtctcatgggccaagcaggagcccagttattggttacaattacggttttagcagaacc
aacaacttactaaccagccatgcccccggatataatcttggctcacttggagcctatgga
atcaggatggatggtagattcagtccattagctagtgctcgtgcagctttctcaaattta
ggttctcccacgtatggaactaatttaggcgccgggcaagggatgaatgcttgctttgca
ggggccagttccggttcaagaaacgacataggttctggtcatgctgtgaattcctatttc
aacaataaccagggcaggtacaacactcctatttgttacaatgcaaacaacagccgcagg
gactcatttttgcactcattatcaacaaacacatggggaaatgctggcctgaatacgtct
ccaaataatgtaaattttgttccatactctggttctgagaccggcgattttggagtcttt
ggaaacagtagacaaaactggggtggttctccttttgccaccttgtttggtggaagctcc
tcagtatacagaggtggagaaaatagtaattcacttggagcagtaggacttggaagaaat
ggtgggatgggagcggcgactacatcttcgtttgctgcatcaggtggaggttttgaggga
tcttttcgggacttttaccaaggtggagctaactatggtgattcaacttggcaaactgcg
tcttcggagctcaatggctcggattcttttggttatgggcttggacattctgaagaggac
tttgctaaagattctgattacatggttggctatagcatcccaactagccgatccagtaga
gatgcaacaggggtctga
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