Primulina tabacum: 142518110
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Entry
142518110 CDS
T11246
Name
(RefSeq) autophagy-related protein 2-like isoform X1
KO
K17906
autophagy-related protein 2
Organism
ptab Primulina tabacum
Pathway
ptab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
142518110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142518110
03029 Mitochondrial biogenesis [BR:
ptab03029
]
142518110
Membrane trafficking [BR:
ptab04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
142518110
Mitochondrial biogenesis [BR:
ptab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
142518110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
142518110
NCBI-ProteinID:
XP_075476906
LinkDB
All DBs
Position
11:38100685..38113649
Genome browser
AA seq
1971 aa
AA seq
DB search
MFTWSIAKSAEAMFSRWAVKRLCKFLLKKKLGQFILGDIDLNQLDVQLRAGTIQLTDLAL
NVDYINHKFGTAAVFVKEGSIGSLKVTMPWKDGGCRIEVDELEVVLAPRRVKVSEDKHES
CSDPKKDHASFSHVSSNIENEVVNSELTNVAVDVHEGVKTIAKMVKWLLTSFHVKIKKLI
VAFDPLLEEENKKGLDQTLVLRIGEVECGTHISEDYSSSSSTKVHNFLGFSRLTNFMKFQ
GAVLELLHMDGLDHQSPPELCTETTHVDWFSGHSSSGSMTTIVSGEKGGFSGSLKLSIPW
KNGSLDICKVDTDLNIEPLELRLQPSTIRCFIFLWGLFKDIGEECEDHNHHGLPNSSLAP
SYCIPPDKGTFSNEGFAGNFCVMEKEPTNALLSESHLISDWVSKIQKDRNNEEPDFGASV
DQFFECFDGLRNSQSALGNSGMWNWTCSVFSAITTASNLASGSLHVACEQQHVETNFNAS
ISKISLLFSFTDEEQKEPSKIKNDEGDAAFHIRCVCAQLVDLLVVFQVRPREMKFELTVD
HIQLIDHLYSENESESLQAHGCNWNSKSEISLIQQMQDGVQSALRTFKKSSKYQGLDHCS
GCLVDISLSIRDNNSCNHILNRNDFHGKDASVKLLQTSGISQCHVTVNSGSSGGLLLGPT
SFSLELAPFVFWVNFDLISMVLDFMNEMTSYIKQTALESGFVFKSESKRYGPSPLGDQGK
ISLQQGSSMTKKSLEGNIFFPNARIILCFPLRGHKNYSSYLCDEQFIAFDIVSSKIGGKE
NQSAKTKPMETSSKRDVMAASCSLHLYLGNLYLFYISSSLVDKSVGSGTYRQDPRFAVEM
IASVTKGTGHLPIICMFWQEGAVTGPWIAKKAKLLACPPENARSKDNPGGKGFEFASVTT
VKDVTDFDTHCRQEIRSSSAYYLHAQLPPITIDLGKYQYENICGLLNQLIEHFPCIVPDP
VRTEEEDSTSQTSVLVECGSITLSVNIEQACDVKYSALKELPGSWHSLTLQVYNFELLSV
SNIGGIRSANFLWVSHGQGSLWGSITKGLQREFLLISCDDSTMGRGNGEGSNVLSSKYSG
SEIINLWDPEGSHNFTSTTVRSATFIAIGGRLDWFNTIFSFFSLPSSEPDQAVDKSLDEI
RGSSFVLNLVDVGLNYEPYFKKLMAGESSDVISSEMNASEAMGELYVSCLLAASSLKFFN
TSVDDCTSGEHKIRLQDLGLLLCTVSESKLVSGTYSAEHLRKTGYVKVAHEAHVEALLRT
NCENGHAWELECEESHIVLNTCHDTTLGLVRLAAQLQKLFAPDMLEHVVHLENRWINAQQ
VHENMDERTLGNESPPSVSHTWTSSLDNKPKTGNLMDEICEDVFQLDVKSDGQAKFFEPH
LRSLSTDISFGEQCFGDLEHLSADLPHTRNFSALEVQASMATSLDEKIPELIEEYFLSDL
RPLSELSLKSQSSDMFYCKSGTVGVAQTGKCGWYEDTSLRILENHASKVNVQSNVRQLVE
IEASSSDSNNGDVGKAEGCIILKNMNVVWRMNGGSDWYNFQNISRPSAILTSGRDATICF
ELALSGIGFDYKFYPDGEISASTLSLTVHDICLNDKSDHAPWKLVLGYYQSKKHPRKFSS
KAVKLNLDAVKPEPSIPLEENRLRIALLPMRLHLHQSQLNFLINFFGNNNSSSEPFPNTP
SFSDKPEEQPEKSGNFPGSVISVEAFLPYFQKFDMWPLLIRVDYSPCHVDLTALSGGKYV
ELVNLVPWKDVELQLKHVEGAGLYGWNSVCETILGEWLEDISKNQIHKLLKGLPPIKSLV
AVGSGAAKLVSLPVKNYRKDHRLIKGMQRGTIAFLRSISIEAIGLGVHLAGGAHNILLQA
EYILTSIPPSVPWQVESRVATTVRSNQPKDAQQGIHQACQSMTSGLGKSASALVQTPLKK
LQRGAGVGSALATAVRASPAAAIAPASAAAHAVHCALLGFRNSLDLEHKRE
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgtggagtatcgccaaatccgctgaggcgatgttctctcgctgggcggtgaag
cgtctttgtaaattcttattgaagaaaaaattgggtcagtttatattgggagatattgat
cttaaccagcttgatgttcagctcagagcaggaactattcagctcaccgatcttgcgcta
aatgtcgattatataaaccataagttcgggacagcagcagtttttgtgaaagaggggtcc
attggatcgctgaaggtgactatgccttggaaggatggtggttgtcgaatcgaggtggac
gagcttgaggtcgttcttgctccacgaagagtgaaggtttctgaagataaacacgaaagt
tgcagcgatccaaaaaaggaccatgctagtttcagccatgtttctagcaatatagaaaat
gaagttgtgaacagtgagctgacaaatgttgctgtagatgttcatgaaggagttaaaact
attgccaaaatggtgaagtggttgctaaccagttttcatgtgaaaattaagaaactaatt
gtagcatttgatccacttctggaagaagaaaataaaaaaggattagatcaaacattggta
cttcgaatcggtgaagtagagtgtggaacacatatctctgaagattattcttctagcagt
tccaccaaagttcataattttcttggctttagtcggttaacaaacttcatgaaatttcag
ggagcggttcttgaattgcttcatatggacggtcttgatcaccagtcaccgcctgaactt
tgcactgaaacaactcatgttgactggttttcaggacacagttcatctggttccatgact
acgatagtttctggagaaaaaggaggtttttccgggagtctcaaattaagtattccgtgg
aaaaatggttccttagatatctgtaaagtggacacagatcttaacattgagcctcttgaa
ttaagacttcaacctagcaccatcagatgcttcatctttctgtggggtctattcaaagat
attggtgaagaatgcgaagaccataatcatcatggactgccaaacagttcgttggctcca
agctattgcatacctcctgacaaggggacgtttagtaatgaaggctttgctggtaacttc
tgcgtgatggagaaagaaccaacaaatgctctgctatcggagtcccatcttatatctgat
tgggtgagtaaaatccagaaagatcgaaataacgaagaaccagactttggagcaagcgtg
gaccagttttttgagtgtttcgatgggctaagaaattcacaatcagctttagggaacagt
ggcatgtggaattggacttgttctgtgtttagcgcaataacaactgcatccaaccttgcg
tctggatcgttacacgttgcctgtgagcaacagcatgttgaaacaaattttaatgcgagc
atttctaaaatatcccttcttttttcttttactgatgaagagcagaaagagccctcaaaa
atcaagaatgatgagggcgatgctgcttttcatattcgttgtgtgtgtgcccaattggtg
gacctcttggttgtcttccaggtacgccctcgagaaatgaaatttgaattgactgtggac
catatccaactaatcgatcacttgtattccgagaatgaatcagaaagtctccaggctcat
ggttgtaattggaattccaaaagtgagatttccttgatccaacaaatgcaagatggtgta
caaagtgctctccgaacttttaaaaagtcgagtaaatatcaaggattagatcattgcagt
ggttgtcttgttgatatttcattgagtatccgggacaacaatagttgtaatcatatattg
aatagaaatgattttcatggcaaagacgccagtgtaaagttgcttcagacctctggcatc
agtcagtgccatgtcacagtgaactcgggttcttctggtggcttgttactgggaccaaca
tctttttccttggagctggcaccttttgttttctgggtgaactttgatttaatcagtatg
gtgttagattttatgaatgaaatgacaagttatatcaaacaaactgccttggagagtggt
tttgtgtttaaatcagaaagtaaaagatatgggccctcacctctgggtgatcaaggaaag
atttcacttcaacagggatccagtatgactaagaaaagcctggagggtaatatattcttt
ccaaatgctagaataatactctgtttcccactcagagggcataagaactatagcagctac
ttgtgtgatgaacagtttattgcttttgacattgtttcatccaaaattggagggaaggag
aatcagtctgctaagacaaagcctatggaaacttcaagcaagagagatgttatggctgcg
tcatgctccttgcatttgtatttgggtaatttatatctattttacatctcctcaagttta
gtggataagagtgttggaagtggaacctacaggcaggatcccagatttgctgttgagatg
atcgcttctgttacgaagggaactggtcatctgcctatcatttgtatgttttggcaggag
ggtgctgtgactggtccttggattgcaaagaaagccaagcttttggcttgtccaccggag
aatgcaaggagtaaagataatcctggtggaaaaggttttgagtttgcctcagtaacgact
gttaaggatgttactgattttgatactcattgtcgacaagagattaggtcgagctctgca
tattatttgcatgcacaattacctcctataaccattgatctaggaaaatatcagtatgag
aacatatgtgggctcctaaatcaattgatagagcattttccgtgcattgttcctgatcca
gtccggacagaagaagaggattctacatctcaaacatcagttttagtggaatgcggctct
attacactttctgttaacatagaacaagcatgtgatgtcaagtactctgcacttaaggaa
cttcctggttcttggcatagtttgacactccaagtgtacaattttgaattactttctgtg
tcaaatattggaggaataaggagtgccaatttcctctgggtgtcccatggtcagggcagt
ctgtggggttcaatcaccaagggtctacaaagagagtttcttttgatatcatgtgatgac
tctacaatggggcgaggtaatggagaaggttcaaatgttttgtcatctaagtattcaggt
tcagaaattataaacttgtgggatccagagggtagtcataattttacttcaactactgtc
agaagtgccactttcattgccatcggggggcgcctagattggttcaatacaatattttct
ttctttagtctaccatcttctgaacctgatcaagcagttgataagagtctggatgaaatt
cgtggatcttcttttgttcttaatttggtggatgttggtttaaactatgaaccatacttt
aaaaaactgatggctggtgaaagttcagatgtcatatcttctgaaatgaatgccagtgaa
gctatgggtgaattgtacgtttcttgtctgttggcagcatcttccttgaaattttttaac
acaagtgtagatgattgcacatcaggggagcacaaaattagacttcaagatctaggtttg
cttctatgcacagtttctgaatctaagttagttagtggtacctacagtgcagaacatctt
aggaaaactggttatgtcaaagttgcccatgaggcacatgttgaagcacttctaaggaca
aactgtgagaatggccatgcatgggaattagaatgtgaggagtcacacatcgtgttgaac
acgtgccatgatacaacattggggttggttagattggctgcccaactgcaaaaacttttt
gcgcctgatatgctagaacatgttgtgcacttggagaataggtggataaatgctcaacag
gtacatgagaacatggatgagaggaccttaggtaacgagtctcctccatcggtttctcac
acttggacttcaagtctagataataaacccaagacaggcaacttgatggatgaaatatgt
gaagatgtctttcagctggatgtaaagtcagatggccaagctaaattttttgaaccacat
cttcggtcgttgtcaactgatatttcttttggcgaacaatgttttggagatctagaacat
ctctctgcggatctgcctcatactaggaatttttcggctcttgaagtccaagctagcatg
gctacatcattagatgaaaagatccctgagttaatcgaagaatatttcttgtctgaccta
cgccccctctcggaattatctttgaagagccagtcatctgacatgttttattgcaagtct
ggtactgttggagtggctcaaactggaaagtgtggctggtacgaggatacatcacttaga
attttagagaatcatgcttcaaaagtgaatgtgcagtctaatgttcggcaacttgttgag
attgaggcgtcttcgagtgattcaaataatggtgatgtgggtaaagcagagggttgcata
attttgaagaacatgaatgttgtttggagaatgaacggtggttctgactggtacaacttt
cagaatatttctcggccttctgcaatactgacttctggaagggatgcaaccatatgcttt
gaacttgcactgtctgggataggatttgattacaaattttaccctgatggtgaaatatct
gcatccacgctctctcttactgttcatgatatctgcctgaatgacaaaagtgatcatgca
ccttggaagctggtgcttggttattatcaatctaaaaagcatccaagaaagttctcttcg
aaagcagtgaagctaaatttagatgctgttaaaccagaaccttcgattcctctagaagag
aacaggttacgcattgctttacttcccatgcggctgcatcttcatcagagtcaacttaat
tttctcatcaacttctttggaaataataattcatcaagtgaacccttccccaatactcct
tccttttctgataaaccagaagagcaaccagagaagagtggcaattttccgggttcagtc
atcagtgtagaggcattccttccttactttcagaaatttgatatgtggcctttgctgatt
cgagttgattatagtccttgccatgtcgacttaactgctctgagtggtggcaagtatgtt
gaactcgttaaccttgttccttggaaggatgtcgagttgcaactcaaacatgtggaagga
gctggcctctatggctggaacagtgtctgtgaaacgatattaggagagtggttggaagat
atttctaaaaatcagattcataaattgttgaaaggcctccctcctatcaagtcactggtt
gctgttggttctggtgctgcaaagttggtgtctttgcctgtgaagaattacagaaaagat
cataggttaatcaaaggaatgcaaagaggtactattgcgtttcttagaagtatttcgatt
gaagccattgggctaggtgtacatctggctgggggagctcacaacatcctcctccaagca
gagtatattctcacaagtattccaccgtctgtaccctggcaagtagaaagcagagtagct
acaactgtgagatcaaatcagcccaaggatgcccaacaaggaattcatcaggcttgccag
agcatgacctctggcctaggaaaatcagcttctgcccttgttcaaactccattgaaaaaa
ctccagcgtggtgctggcgtgggttctgctttggcaactgctgtgcgggctagtccagca
gcagctattgcccctgcttctgctgctgcacatgcggtccattgtgctcttcttggcttt
aggaacagccttgacctggagcataaaagagaatga
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integrated database retrieval system
