Primulina tabacum: 142518129
Help
Entry
142518129 CDS
T11246
Name
(RefSeq) protein SPA1-RELATED 2-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
ptab Primulina tabacum
Pathway
ptab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
142518129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142518129
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
142518129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Pkinase
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_NUP159_NUP214
PK_Tyr_Ser-Thr
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_RFWD3
YflT
WD40_like
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
142518129
NCBI-ProteinID:
XP_075476925
LinkDB
All DBs
Position
11:10270919..10279357
Genome browser
AA seq
1037 aa
AA seq
DB search
MDEAVSDAMAEPVGTTHIRNKENEFSLKSSSSSGLESNEMAMPRIDDYPENLKNPSPDIS
YVKFLDRIGSSNHASASPHCMDDAGVMVEELTLKNYDGEKMAIVGTSNNRNRMQTRRNQW
QHLYQVAGGSGVNSWRGQSRCKEKDLKTEIAWEDRDKNLFCELLDKREPKKNSNCKTFVN
DLLSSDNKVSTSEMCSSGTVRTRFLSKSGFSDYLKSTLRGKGVIHKSPVCKRSSVKYGDH
DHPKTGNARLTDSVIPLGSTAAAASPLSHDFSEPWICPNSDNVGDGISFRDWLETGKSKV
DKVESLRIFKQVLDLVDLAHSRRSFLQDLRPSCFKLVELCQILYIGSSAHLGVKENANDQ
EIHLSNLSQTEMRSIHLRKPPSDSQSVKKRKLGENPNVAWRWPQYPSRSSIIAAPENVVL
ADNAAPKDPSNDFAKEHIPKTESNNKSLFFGLNVPTSSQQLQASVSCMLEKKWYSSPEQF
NDNGCTIASNIYSLGVLLFELQCSFDSGRSRAAAMLDLRHRILPPSFLSESPKEAGFCLW
LLHPEPSLRPTTREILQSEFISGIKESSGDKFLSSIDEEKGKSELLLSFLSSLNDVKQKD
ESNLVEQIQQIEADIEEVEKRRPKKSPVLSPSPGESLSACDKETRSTNNIKQIESAYFSM
RPSVRLSASDVATQRYGELLGKNEAKGNTTDYLGGFFDGLCKYARYSNFKVQGILRLGDY
NNSPNVICSLSFDRDEDYLATAGVSKKIKVFGFQALFDESVDIHYPVIEMENKSKLSCIC
WNSYISNYLASTDYDGTVKLWDATTGQSFSHFSEHTERAWSVDFSRVDPLKLASGSDDRS
VKLWSINEKNSLTTIKNHANVCCVQFSSDSPHLLAFSSADYKTFCYDVRNISTPWCILAG
HEKAVSYTKFLDATTLVTASTDNTLKIWNLNKTSSNSISRNACVSTLRGHTNEKNFVGLS
VADGYITCGSETNEVFAYYRSLPVPITSHKFGSIDQITGKETEESNGQFISSVCWRRKSN
MVVAANSSGCIKLLHLV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcggtcagcgatgccatggctgaacctgttggcacaacccacatccgaaat
aaagaaaacgagttctcattgaaatctagcagctcaagtgggcttgaatccaatgaaatg
gctatgcctcgtatagatgattatcccgagaacttgaaaaatccatcaccagatatttca
tatgtgaaatttttagatagaatcggttcttctaatcatgctagcgccagccctcattgt
atggatgatgcaggggtgatggtcgaggagttgactctgaaaaactatgatggagaaaag
atggctatagtcggtacatcaaataatagaaatagaatgcaaactaggcgaaaccaatgg
cagcatttgtatcaagtggctggtggatcaggagttaatagctggcgtggacaatctcgg
tgcaaagaaaaagatctcaaaacagaaattgcatgggaagacagagacaaaaatttattt
tgtgagcttctagataaaagagaacctaaaaagaacagcaattgcaagacattcgtgaat
gatcttttgagtagtgataacaaagtttctacaagtgaaatgtgttcttctggaacagta
aggacaagatttttatcaaaatccggtttctcagactacttgaaaagtacactgagaggc
aaaggagtgatacataaaagtccagtttgcaaaagatcgagcgtcaagtatggggaccat
gatcatcccaagactggcaatgccagattaacagattctgttataccattaggttcaact
gcagctgctgcttcgcctctttcacatgatttttctgaaccgtggatttgtccgaattct
gataatgttggtgatggaatcagttttagagattggcttgaaacaggtaaaagtaaggta
gataaggtggagagcttgcgcatatttaaacaggtcctggatcttgttgatcttgctcat
tctcgtaggtctttccttcaagatttgaggccttcttgcttcaagttggtagaattatgc
cagatactgtacataggatcttctgcacaccttggggtcaaagaaaatgccaatgatcaa
gagatccacctttcaaacttaagccaaactgaaatgaggtcaatacatctgagaaagcct
ccctctgatagtcagtcagtgaagaagaggaaattaggcgagaatccgaatgttgcttgg
aggtggccgcaatatccatctaggtctagcattatagctgcacccgaaaatgttgtcctt
gcagataatgctgccccgaaggatcctagcaatgattttgctaaggagcacatccctaag
acagaaagcaataacaagagtttattttttggactgaacgttcctacgtcatcgcagcaa
ttgcaggcttctgtgagctgtatgttggaaaagaagtggtattccagtcctgagcagttc
aatgacaatggctgcacaattgcatcaaatatctattccttgggggttcttctatttgag
ctacaatgctcatttgactctggaagatctcgtgctgctgcgatgcttgatttacgtcat
agaattctccctcctagcttcctctctgagagtcccaaggaagccgggttttgcctttgg
ctgcttcatcctgaaccttctttacgcccaacgaccagggaaattctgcaatctgaattt
atcagtggaattaaagaatcatccggggataagtttttgtcatctattgatgaagaaaaa
ggaaaatctgaattgttgttgtcttttctttcgtcgttaaatgatgtaaagcaaaaggat
gaatccaatctagttgaacaaatccagcagatagaagctgacattgaagaggttgagaaa
aggcggccaaaaaaatcaccggtcttatctccctcacctggggaatcattgtccgcatgt
gataaagaaacaaggtcaacaaataatatcaagcaaattgaaagtgcttacttttctatg
aggcccagtgttcggctttcagctagcgatgttgccactcaaagatatggagaactattg
gggaagaatgaagctaagggtaataccacagattatttaggcggtttctttgatggtttg
tgcaaatatgctcgttacagtaatttcaaagttcaagggattttgcggcttggagattat
aataattccccgaatgtgatatgttcattgagttttgaccgagatgaggactatttagct
acagctggggtgtcaaaaaagataaaagtttttggatttcaagctttatttgatgaatcc
gtggacattcattatccggttattgagatggaaaacaaatcaaagctcagttgcatttgc
tggaatagctacataagtaactatcttgcttcgactgattatgatggcactgtcaagtta
tgggatgcgacaactggtcaaagtttttcccatttcagtgaacatactgaaagagcatgg
tccgttgatttctctcgtgtggatcctctaaaactagccagtggtagtgatgatcgttct
gtaaaactttggagcatcaacgagaaaaatagtttaaccacaatcaagaaccatgcaaat
gtgtgctgtgtgcaattctcatccgactcccctcacttgttggcatttagctccgccgac
tacaagacattttgctatgatgttcgtaacatttcaactccttggtgcatattggctggc
catgagaaagctgttagttatacaaaattcttggatgcaacgactcttgttaccgcatca
actgacaacacgcttaagatttggaatctgaataaaacgagttctaattctatatcaaga
aatgcttgtgtatcgacacttagaggacacacaaatgagaagaactttgtaggtttatct
gttgctgatggttatataacgtgcggttcagagaccaatgaggtttttgcatattacaga
tctctacctgtgccaattacttctcataaatttggctccattgatcaaattacgggcaag
gaaaccgaagagagcaacggacagttcatttcaagtgtttgctggagacgaaaatcaaat
atggtggttgctgctaattcatctggctgcatcaaacttctgcatttggtttag
DBGET
integrated database retrieval system