Primulina tabacum: 142518244
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Entry
142518244 CDS
T11246
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ptab Primulina tabacum
Pathway
ptab00900
Terpenoid backbone biosynthesis
ptab01100
Metabolic pathways
ptab01110
Biosynthesis of secondary metabolites
Module
ptab_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
142518244
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ptab01006
]
142518244
Enzymes [BR:
ptab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
142518244
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
142518244
2.5.1.29 geranylgeranyl diphosphate synthase
142518244
Prenyltransferases [BR:
ptab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
142518244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
142518244
NCBI-ProteinID:
XP_075477106
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All DBs
Position
11:complement(36749521..36751381)
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AA seq
330 aa
AA seq
DB search
MVFPTIATASPQVPFPKTTSRIIRRPIRCGSASVSTQFDLKTYWTSLIKEIDQKLDEAIP
VQYPQRIYEAMRYSVLAKGAKRSPPVMCVAACEIFGGNRQAAFPTACALEMVHAASLIHD
DLPCMDDDPSRRGQPSNHTKFGVDMAILAGDALFPLGFRHIVSHTPTDIIPEARLIRVIA
EIARAVGSTGMAAGQFMDLEGGPNAVDFVQEKKFGEMGQCSAVCGGLLAGASDDEIQHLR
QYGQAVGVLYQVVDDILEAKSGTGGGEKKRKAKSYVSAYGVEKAIKVAEDLKSQAKRALD
GFEKYGERVLPLYSFVDYAADRGFSMGESV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtgttccctacaatagccacagcatctccacaggttcccttcccgaagacgacttcg
cggatcatacgccgcccaatccggtgcggctccgcttcggtatctactcaatttgatctc
aaaacctactggacctctctgattaaggagatcgaccagaaactcgatgaggctattcca
gtgcagtacccgcagcggatctatgaagccatgcgttactcggttctggctaaaggcgcc
aaaagatcgccgccggtcatgtgtgtcgccgcctgtgagatttttggtggtaatcgccaa
gccgccttccccactgcctgtgctcttgaaatggttcatgctgcttcgcttatccacgat
gacttgccatgtatggatgatgacccgtctcgaaggggccaaccctctaatcatacgaaa
tttggagttgacatggcaatactagctggggatgcattgttccctcttggtttccgccac
attgtttcacacaccccaactgatatcatccctgaggctcgcctcattcgggtaattgct
gagattgcaagagcagttgggtccactggcatggctgctggtcagtttatggacctcgag
ggtggaccaaatgcagttgactttgtccaagaaaagaagtttggtgagatgggtcagtgc
tcagcagtgtgtggaggccttttagctggtgcttcggatgatgagattcagcatctgaga
caatatggacaggctgtgggtgttttgtatcaggtggttgatgatattctggaagcaaaa
tcagggacgggcggtggcgagaaaaaaaggaaagctaaaagttatgtatctgcatacggt
gttgagaaggcgataaaagtggccgaggatctgaagtctcaagctaaaagggcattggat
ggattcgagaaatacggtgagagagttctgccgttatacagttttgtagattatgctgct
gatagaggttttagcatgggcgaatcagtgtaa
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