Primulina tabacum: 142518435
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Entry
142518435 CDS
T11246
Name
(RefSeq) protein NPGR2-like
KO
K21843
tetratricopeptide repeat protein 7
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptab04131
]
142518435
Membrane trafficking [BR:
ptab04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
142518435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
ANAPC3
TPR_17
TPR_12
TPR_8
TPR_11
TPR_CcmH_CycH
Vps39_1
TPR_16
TTC7_N
ARM_TT21
TPR_9
Motif
Other DBs
NCBI-GeneID:
142518435
NCBI-ProteinID:
XP_075477337
LinkDB
All DBs
Position
11:5138709..5143015
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AA seq
731 aa
AA seq
DB search
MSFKYWFRNQKSSLSLKFGKMMKCICSGEQMRGDEIIPSSESLATRDFSASGYSSRPGDD
TKVDSSNIEEAESSLRESGFLNYEEARALLGRLEYQKGNIEAALSVFEGIDIAAVIPRIK
ITVVRRCELSRRHSQSDTALPMSMHAVSLLVEAIFLKAKSLQALGRYAEAAQSCKVILDA
LESAIPEGVPENFASDCKLLETLNKAVELLPELWILAYTHQEAILAYRRALLHQWSLDVE
TRTRIEKNFAVFLLYSGNNAMPPNLRSQTEGSFIPRNNTEEAVLLLLLIVRKFILGRVGW
DPSILDHLGFALSISSECVSLAHQIEELPPRTNDENEKYTSLALCYHAEGENMVALNLLR
NFLKNRESRDVGFELLLASKICIEDCDCLEEGIGYIYKYLTELGNCLQRAGFANYLRGLC
LSAQSRGALSDSKRIMKQSEALEAFETAQRMTNEKKACIVFSLCLENAEQRKLDVALYYA
KLLLKLEAGSNVNGWILFARILSAQKRYVDAENIIDTALNEAGKWNQGELLRTKAKLQIA
QDRLREAVETYTKLLAVLQVQRKSFGVHKKLVKNMRKINRSLEVEIWHDLANVYTSLSQW
RDAEICLSKSEEINPHSASRLHSTGLLYEGKEQHKEALKFFEKALDIEPNHVPSLISTAV
ILRRLSEQSQPIVKSFLTDALRLERTNATAWYNLGLLYKTGSKALALEAAECFEAAALLE
ESEPVEPFRDA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaaatactggtttcgcaaccaaaagagtagcttgagtttgaaatttgggaag
atgatgaaatgtatttgctctggagagcaaatgagaggagatgaaatcattccttcgtca
gagtcccttgcaacacgggacttttcagccagtgggtattcttctcgaccaggggatgat
acgaaagtcgactccagcaatatagaagaggcggaatcatctcttcgagagagtgggttt
ctaaattatgaggaagccagagctttattggggcgactagagtaccaaaaagggaacatc
gaagctgctcttagtgtttttgaaggaattgatattgctgcagtgattcctcgaataaaa
ataactgtagttcgtaggtgtgagctgtctagacgtcattctcagagtgacactgctcta
cctatgtcaatgcatgccgttagtttgcttgttgaggctatatttctcaaagcaaaatca
ctacaagctctaggaaggtatgcagaagctgctcaatcatgtaaagtaatattggatgct
cttgagtctgcaatccctgaaggtgtgcctgaaaattttgcttctgactgtaaattgctg
gagaccttaaacaaagcagtagaactacttccagagttatggatccttgcttatactcat
caagaagcaattttagcctacagaagggccctgcttcatcaatggagtcttgatgtagag
accagaacaagaattgaaaagaattttgccgtttttcttctttatagtggtaacaatgca
atgcctccaaatcttcgctcccaaacggaggggtcgttcataccaagaaacaacactgaa
gaagcagtcctcctcctcctccttattgtccggaaatttatcctcggaagggttggatgg
gacccatcaatcttggatcaccttggtttcgcattatccatctccagcgaatgtgtgtcc
ctcgcccatcagatcgaagagttgcctccaaggacaaacgatgaaaatgaaaaatacacg
tctctagctctttgttaccatgcagaaggtgaaaatatggttgctctcaatttgttgcga
aattttttgaaaaatagagaaagtcgtgatgttgggtttgagctactgctggcttcgaag
atctgtatagaggattgtgattgccttgaggaagggatagggtatatttacaaatatctt
actgaattaggaaattgtcttcaacgggctggtttcgcaaactaccttcgaggtctttgt
ctctcagcacaatctagaggcgctttgtctgattccaaaagaataatgaagcaatccgaa
gcacttgaagcatttgaaaccgcacaaagaatgactaatgagaaaaaagcctgcattgta
ttctctctttgtctggaaaatgctgagcagagaaagttagatgtcgctctttattatgcg
aagctgttattgaaactggaggctggttctaacgtaaatggatggattctttttgctcga
attttatctgctcagaagagatacgttgacgcggaaaacattattgatacagctttaaat
gaagcagggaaatggaatcaaggagaattgctgcgtactaaggccaaactccagattgca
caggaccgtttaagggaggcagttgaaacatatacaaaactccttgctgttcttcaagtc
cagaggaagagttttggagttcataaaaagcttgtaaagaacatgaggaaaatcaataga
agtttagaagtagaaatatggcatgatctagcaaatgtgtacaccagcttatcacagtgg
cgggatgccgaaatatgtctttcgaaatctgaagagatcaatccacattcagcttcaaga
ttacattccacaggtttactgtatgaaggtaaagaacaacataaggaagctctaaagttt
ttcgagaaggcactagatattgaacctaatcacgtcccaagcttgatatctactgccgtt
attctcagacgactcagtgagcaatcacagccaatagttaaaagctttctgaccgacgca
ttgcgccttgaaagaaccaacgctactgcatggtacaatcttggcctgctttacaagact
gggagcaaggcattagctttggaagcagccgagtgttttgaggctgcagccctgcttgaa
gaatctgagccagttgaacctttcagagatgcgtga
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