Primulina tabacum: 142519021
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Entry
142519021 CDS
T11246
Name
(RefSeq) RING-H2 finger protein ATL1-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ptab Primulina tabacum
Brite
KEGG Orthology (KO) [BR:
ptab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptab04121
]
142519021
Enzymes [BR:
ptab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142519021
Ubiquitin system [BR:
ptab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142519021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Prok-RING_4
zf-RING_16
Prok-RING_1
zf_RING_Vps8_fungal
zf-RING-like
RINGv
zf-RING_4
FANCL_C
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
142519021
NCBI-ProteinID:
XP_075478014
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All DBs
Position
1:46210527..46211742
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AA seq
335 aa
AA seq
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MEAAPNLSFTSESLAPCPPASANNSFTVLAIAVLCIAAAVFLLLSYYVFVIKGYFRWQQI
DPLRHFSFRPRERSDVEDSVSFRSPPWQSRGLDEFLIREIPTFQYRECESAEICNSSSRF
LKCVVCLNEFQENDLLRALPKCAHAFHSDCIDVWLQKNSNCPLCRSTISDRNGYQIEKII
APNSSPQDSEPVGGRNIGGYEDFVAREDGTGSLSSRQQETIFRGDLNRFLVQSLSHSSRK
FQKSKPGKFEKVSSMGDEGIDVRHEDHQFSVQPIRRSFSMDSAVDRHVYISVQEILVHNR
NLRHARNSEESRSQRSIFSFGHGSISRNAVLPVEL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgcaccaaatctcagtttcacatctgaatctctagctccttgtccaccggcg
tctgccaataatagtttcacagttcttgccattgcagtattatgcattgcagccgcagtt
tttttgctcctcagctactacgtttttgttatcaaaggctacttcagatggcagcaaatc
gacccgttgaggcatttttccttccggccgcgggaacggtcggatgttgaagattccgtg
tcattccgatcaccgccgtggcaaagccgagggctcgatgagtttctgattcgagaaatt
ccaaccttccagtatagagagtgtgaatcagcagaaatctgtaacagtagcagcagattt
ttgaaatgtgtggtctgtttgaatgagttccaagaaaatgacttgttgagagctcttccc
aagtgtgctcatgccttccattcagattgtattgatgtgtggctgcaaaagaactccaac
tgccctttgtgcagatcaactatttcggacaggaacgggtatcagatcgagaaaataatc
gcaccaaattcatcacctcaagattcggaaccagttggtggcagaaatattggggggtat
gaagactttgtagcgagggaagatggaacagggagtttatccagtagacagcaagaaaca
atatttagaggtgatttgaacagattcttggtgcaatctttaagtcattcctcaagaaag
tttcagaaatcgaaacccggaaagtttgaaaaagtttcgagcatgggagacgaagggatt
gatgtaagacacgaagatcatcagttttcggttcagcccatccgaagatccttttcaatg
gattctgctgtggatcgccatgtatatatatcagttcaagagattttagtgcataatagg
aatcttagacatgctagaaacagtgaagaaagcagaagccaaagatccattttttctttt
ggacatggaagcatatcaagaaatgctgtccttcctgttgaattatag
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