KEGG   Primulina tabacum: 142519021
Entry
142519021         CDS       T11246                                 
Name
(RefSeq) RING-H2 finger protein ATL1-like
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
ptab  Primulina tabacum
Brite
KEGG Orthology (KO) [BR:ptab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptab04121]
    142519021
Enzymes [BR:ptab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     142519021
Ubiquitin system [BR:ptab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    142519021
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-C3HC4_3 zf-RING_5 Prok-RING_4 zf-RING_16 Prok-RING_1 zf_RING_Vps8_fungal zf-RING-like RINGv zf-RING_4 FANCL_C VPS18_RING_C
Other DBs
NCBI-GeneID: 142519021
NCBI-ProteinID: XP_075478014
LinkDB
Position
1:46210527..46211742
AA seq 335 aa
MEAAPNLSFTSESLAPCPPASANNSFTVLAIAVLCIAAAVFLLLSYYVFVIKGYFRWQQI
DPLRHFSFRPRERSDVEDSVSFRSPPWQSRGLDEFLIREIPTFQYRECESAEICNSSSRF
LKCVVCLNEFQENDLLRALPKCAHAFHSDCIDVWLQKNSNCPLCRSTISDRNGYQIEKII
APNSSPQDSEPVGGRNIGGYEDFVAREDGTGSLSSRQQETIFRGDLNRFLVQSLSHSSRK
FQKSKPGKFEKVSSMGDEGIDVRHEDHQFSVQPIRRSFSMDSAVDRHVYISVQEILVHNR
NLRHARNSEESRSQRSIFSFGHGSISRNAVLPVEL
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggaggctgcaccaaatctcagtttcacatctgaatctctagctccttgtccaccggcg
tctgccaataatagtttcacagttcttgccattgcagtattatgcattgcagccgcagtt
tttttgctcctcagctactacgtttttgttatcaaaggctacttcagatggcagcaaatc
gacccgttgaggcatttttccttccggccgcgggaacggtcggatgttgaagattccgtg
tcattccgatcaccgccgtggcaaagccgagggctcgatgagtttctgattcgagaaatt
ccaaccttccagtatagagagtgtgaatcagcagaaatctgtaacagtagcagcagattt
ttgaaatgtgtggtctgtttgaatgagttccaagaaaatgacttgttgagagctcttccc
aagtgtgctcatgccttccattcagattgtattgatgtgtggctgcaaaagaactccaac
tgccctttgtgcagatcaactatttcggacaggaacgggtatcagatcgagaaaataatc
gcaccaaattcatcacctcaagattcggaaccagttggtggcagaaatattggggggtat
gaagactttgtagcgagggaagatggaacagggagtttatccagtagacagcaagaaaca
atatttagaggtgatttgaacagattcttggtgcaatctttaagtcattcctcaagaaag
tttcagaaatcgaaacccggaaagtttgaaaaagtttcgagcatgggagacgaagggatt
gatgtaagacacgaagatcatcagttttcggttcagcccatccgaagatccttttcaatg
gattctgctgtggatcgccatgtatatatatcagttcaagagattttagtgcataatagg
aatcttagacatgctagaaacagtgaagaaagcagaagccaaagatccattttttctttt
ggacatggaagcatatcaagaaatgctgtccttcctgttgaattatag

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